Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4067 ATGGCAAAAAAGTATGAAGGAGTTGCTATAGGAATTGACCTAGGCACGACTTACTCATGTGTTGGAGTGTGGCAAGAACAAAACGACCGTGTTGAAATCATTCACAATGATCAAGGAAACAAAACAACACCTTCTTGTGTTGCTTTTACCAACACTCAAAGATTGATTGGTGATGCTGCCAAAAATCAAGCTTCTTCCAACCCAACCAACACTGTCTTTGATGCAAAGAGGTTGATTGGAAGGAATTATAGTGATTCTGTTATTCAAAATGATATTCTATTGTGGCCCTTTAAGGTCATTGATGGGGAGGATGATAAGCCGACTATCGTTGTGAGCTACAAGGGTGAGGAAAAACACCTTGTTGCCGAGGAAATATCAGCTATGATTCTCACACATATGCGAGAGATTGCGGGGGCATTTTTGGAGTCACCCGTTAAGAATGCAGTGATTACCGTACCGGCTTATTTTAATGATGCGCAGCGAAGAGCCACCAAAGATGCAGGTGATATTGCTGGTCTCAATGTTATGAGGATAATCAATGAGCCAACTGCGGCGGCTCTTGCATATGGACTTCAAAAGAGAGCTAATTGTGTTGAAGAGAGAACTATTTTCATCTTTGATCTTGGTGGTGGAACTTTTGATGTGTCTCTCCTTACAATTAAGAACAATGCCTTTGAAGAGTGTTCCAAACTTAACGCTGCGAGATGTTACACCGTTGTCACTTGGTAA 729 0.4156 MAKKYEGVAIGIDLGTTYSCVGVWQEQNDRVEIIHNDQGNKTTPSCVAFTNTQRLIGDAAKNQASSNPTNTVFDAKRLIGRNYSDSVIQNDILLWPFKVIDGEDDKPTIVVSYKGEEKHLVAEEISAMILTHMREIAGAFLESPVKNAVITVPAYFNDAQRRATKDAGDIAGLNVMRIINEPTAAALAYGLQKRANCVEERTIFIFDLGGGTFDVSLLTIKNNAFEECSKLNAARCYTVVTW* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4067 242 PRINTS 70kDa heat shock protein signature 8 21 - -
Psa3g4067 242 PRINTS 70kDa heat shock protein signature 38 50 - -
Psa3g4067 242 PRINTS 70kDa heat shock protein signature 60 68 - -
Psa3g4067 242 PRINTS 70kDa heat shock protein signature 148 168 - -
Psa3g4067 242 PRINTS 70kDa heat shock protein signature 211 221 - -
Psa3g4067 242 Pfam Hsp70 protein 9 226 IPR013126 GO:0005524|GO:0140662
Psa3g4067 242 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 226 - -
Psa3g4067 242 PANTHER HEAT SHOCK PROTEIN 70KDA 4 226 IPR013126 GO:0005524|GO:0140662
Psa3g4067 242 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Psa3g4067 242 SUPERFAMILY Actin-like ATPase domain 200 227 IPR043129 -
Psa3g4067 242 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Psa3g4067 242 Gene3D - 73 124 - -
Psa3g4067 242 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Psa3g4067 242 Gene3D - 5 201 - -
Psa3g4067 242 Gene3D - 202 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4067 Psa-Chr3 380165222 380166107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4067 1 226 Calmodulin-binding Proteins AT3G12580 73.894 2.82e-115 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4067 K03283 - gmx:102667578 358.992