Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4065 ATGGCCAAAAAATATGAGGGACCTGCTATTGGAATCGACCTTGGCATGACTTATTCATGTGTTGCTGTATGGCAGGGGCAAAACAACCGAACTGAGATTATCCACAATGAACAAGGAAACAGAATCACGCCTTCTTTTGTTGCTTTCTCTAGTGATCAAAGGTTGATTGGTGATGCTGCTAAAAATCAAGCTGCTTCAAATCCAGCCAACACTATCTTTGACGCGAAGAGGTTAATTGGAAGGAAATACAGTGATATCACTATTCAGAATGATTTACTGTTGTGGCCCTTTAAGGTCATTGCTGGTTTTAATGACAACCCAGTGATCCTTGTTAATTACAGGGGTGAAGAAAAAAGCTTTTCTCCAGAGGAAATATCATCTATGATCCTCACAAAAATGTGGGAAATCGCAGAGAAACTTTTGGAGACACCTATTAAAAATGCAGTGATTACAGTTCCGGCCTATTTCAATGATTCTCAGCGAAAAGCCACCATAGATGCTGGTGCCATTGCAGGCTTGAATGTAATGCAGATGATCAATGAACCAACTGCTGCTGCCCTTGCACATGGCCTTCAAAAAAGACCTAATTGTGTTGAAGATAGAAACATTTTCAACTTTGATTTCGGTGTTGGAACTTTTGATGTATCTCTCCTCACACTTAAGAATAATGTCTTTCATGTTAAGGCTGTTGCTGGAGACACTCACCTCGGAGGAGAGGACTTTGACAACAGAATGATGAATCACTTCGTAGAGGAGATCCAAAGGAAGAACAAAGTAGACATTAGTGAAAACCCAGGATCTTTGAGGAGGATACGAACTAGCTGCGAGAGGGCAAAAAGGACTCTTTCTTTTGCTGTTGTTGCTACTATTGAGGTAAATGCTTTGTTTCAGGGAATTGAGTTATCTTCATCTATCACTCGAGCAAAATTTGAGATGATCAACATAGACCTCTTTGAAAAGTGTATGGAGATTGTTGAGAGCTGCTTTGTGGATTCTGGAATGGACAAAAGTAGTGTAGATGATGTGGTCCTTATTGGTGGCTCGTCCCGAATCCCCAAACTGCAACAACTATTGCAAGACTTTTTTAATGGGAAGGATTTGTGTATGAGCTTGGTCCTTATTGGTGGCTCGTCCCGAATCCCCAAACTGCAACAACTATTGCAAGACTTTTTTAATGGGAAGGATTTGTGTATGAGCATCAACCCTGATGAAGCAGTGGCTTATGGTGCAGCTGTCCAGGCTGCTATGTTAAATAGAAAGGACGTGATTCCTAGGAACACTTCCATTCCTATCACTAAGAAGAAAACATATTTTACAGATGTAGATAACCAAAGTAGAGTTTCAATTAAGGTTTATGAGGGTGAGAGAATAATAGCTAGTGAGAACAACTTGCTTGGTGTGTTTTCTCTCTCACTTCCTCTTGCACCACGCGGTCTTCCTATCCAAGTATACTTTGCAATAGATGCAGATGGTATATTAAACTTGGCTGCAGAGGAAGAAACCAGTGGTAATAAGAAAGATATTACAATAATGAATGAAACAGAAAGCCTATCAACTGAAAAACCTGAGAGAATGATTCAAGAAGCTGAGAATTTTAAGGCTGAAGAGAAGAAACTTGAGGAGAAAGTTAAAGCAATAAATGATTTGAATGATTATCTTTGCCATGTGAGGAAAGTAATTGCTGATAATGATGTTAGTTCTTTGATTTCCCCTGTTGACAAATTGAAGATCTATACTGCAGTTGTGAAAGGCCAAAATTTGCTGGATGGAAACAAGGACGAAGAAACACATGTCTTTGTGGATTTTCTAAAGGAATTTCAGGGCATGGTTGATTCTGCTTTGTACAAGATCACTAGTGAAGTTTGA 1866 0.3955 MAKKYEGPAIGIDLGMTYSCVAVWQGQNNRTEIIHNEQGNRITPSFVAFSSDQRLIGDAAKNQAASNPANTIFDAKRLIGRKYSDITIQNDLLLWPFKVIAGFNDNPVILVNYRGEEKSFSPEEISSMILTKMWEIAEKLLETPIKNAVITVPAYFNDSQRKATIDAGAIAGLNVMQMINEPTAAALAHGLQKRPNCVEDRNIFNFDFGVGTFDVSLLTLKNNVFHVKAVAGDTHLGGEDFDNRMMNHFVEEIQRKNKVDISENPGSLRRIRTSCERAKRTLSFAVVATIEVNALFQGIELSSSITRAKFEMINIDLFEKCMEIVESCFVDSGMDKSSVDDVVLIGGSSRIPKLQQLLQDFFNGKDLCMSLVLIGGSSRIPKLQQLLQDFFNGKDLCMSINPDEAVAYGAAVQAAMLNRKDVIPRNTSIPITKKKTYFTDVDNQSRVSIKVYEGERIIASENNLLGVFSLSLPLAPRGLPIQVYFAIDADGILNLAAEEETSGNKKDITIMNETESLSTEKPERMIQEAENFKAEEKKLEEKVKAINDLNDYLCHVRKVIADNDVSSLISPVDKLKIYTAVVKGQNLLDGNKDEETHVFVDFLKEFQGMVDSALYKITSEV* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4065 621 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Psa3g4065 621 PRINTS 70kDa heat shock protein signature 8 21 - -
Psa3g4065 621 PRINTS 70kDa heat shock protein signature 38 50 - -
Psa3g4065 621 PRINTS 70kDa heat shock protein signature 60 68 - -
Psa3g4065 621 PRINTS 70kDa heat shock protein signature 148 168 - -
Psa3g4065 621 PRINTS 70kDa heat shock protein signature 368 384 - -
Psa3g4065 621 PRINTS 70kDa heat shock protein signature 400 420 - -
Psa3g4065 621 PRINTS 70kDa heat shock protein signature 478 494 - -
Psa3g4065 621 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 422 548 IPR029047 -
Psa3g4065 621 Coils Coil 529 549 - -
Psa3g4065 621 ProSitePatterns Heat shock hsp70 proteins family signature 3. 371 385 IPR018181 -
Psa3g4065 621 SUPERFAMILY Actin-like ATPase domain 201 369 IPR043129 -
Psa3g4065 621 Gene3D - 517 619 IPR029048 -
Psa3g4065 621 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Psa3g4065 621 Pfam Hsp70 protein 371 597 IPR013126 GO:0005524|GO:0140662
Psa3g4065 621 Pfam Hsp70 protein 9 370 IPR013126 GO:0005524|GO:0140662
Psa3g4065 621 Gene3D Actin; Chain A, domain 4 237 320 - -
Psa3g4065 621 Gene3D - 194 368 - -
Psa3g4065 621 Gene3D - 10 370 - -
Psa3g4065 621 PANTHER HEAT SHOCK PROTEIN 70KDA 371 418 IPR013126 GO:0005524|GO:0140662
Psa3g4065 621 PANTHER HEAT SHOCK PROTEIN 70KDA 4 370 IPR013126 GO:0005524|GO:0140662
Psa3g4065 621 PANTHER HEAT SHOCK PROTEIN 70KDA 422 617 IPR013126 GO:0005524|GO:0140662
Psa3g4065 621 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 545 618 IPR029048 -
Psa3g4065 621 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 410 514 IPR029047 -
Psa3g4065 621 Gene3D - 371 402 - -
Psa3g4065 621 SUPERFAMILY Actin-like ATPase domain 371 417 IPR043129 -
Psa3g4065 621 PANTHER HEAT SHOCK 70 KDA PROTEIN 422 617 - -
Psa3g4065 621 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 370 - -
Psa3g4065 621 PANTHER HEAT SHOCK 70 KDA PROTEIN 371 418 - -
Psa3g4065 621 Gene3D - 73 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4065 Psa-Chr3 379840022 379842077 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4065 1 617 Calmodulin-binding Proteins AT3G12580 55.023 0.0 700