Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4063 ATGGCGAAGAAATACGAGGGAGTTGCTATAGGAATTGACCTAGGCACGACGTACTCATGTGTTGGAGTGTGGCAAGAACAAAACGACCGTGTTGAAATCATTCACAATGATCAAGGAAACAAAACAACACCTTCTTGTGTTGCTTTTACCAACACTCAAAGATTGATTGGTGATGCTGCCAAAAATCAAGCTTCCTCTAACCCAACCAACACTGTATTTGATGCTAAGAGGTTGATCGGAAGGAAATATAGCGATTCTGTTATTCAAAGTGATATTCTATTATGGCCCTTTAAGGTCATTGCCGATGATAATGACAAGCCGATGATCCTTGTGAGCTACAAGGGTGAGGAAAAACACCTTGTTGCTGAGGAAATATCAGCCATGATTCTCACACAGATGCGAGAGATTGCGGGGGCATTTTTGGAATCTCCTGTTAAGAATGCAGTGATTACCGTACCTGCTTATTTTAATGATTCACAGCGAAGAGCCACCAAAGACGCCGGTGATATTGCTGGTCTCAATGTAATTCGGATAATCAATGAGCCAACTGCAGCGGCTCTTGCATATGGACTTCAAAAGCGAGCTAATTGTGTTGAAGAGAGAACTATCTTCATCTTTGATCTTGGTGGCGGGACTTTTGACGTGTCTCTCCTTACTATTAGGAATAACGTCTTTGAAGTCAAGGCCACTGCTGGAGATACTCATCTTGGAGGAGAAGACTTTGATAATCGAATATTGAATCACTTTGTGAAGGAGTTTAAGAGGAAGAATAAAGTTGACATTAGTGGGAACTCAAAAGCTCTGAGGAGATTGAGAACTGTCTGTGAGAGGGCAAAAAGGACACTGTCATATGATACTGAGGCCACAATTGACATAGATGCTATATATGAGGGAATTGACTTCTGTTCATCAATTACTCGGGCCAAGTTTGAGCAATTAAATATGGACTTGTTTGAAAAGTGTATGCAGACTGTTGAAAACTGTCTTGTTGATTCTAAGATAGACAAGAGTAGTGTTGATGACATTGTTCTGGTTGGTGGCTCTTCTAGGATACCCAAAGTTAAACAGTTGTTGCAGGACTTTTTCAAGGGAAAGGAGTTATGCAAGAGCATAAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTACAGGCTGCTTTGTTGAGTGAAGGCACTGTACAGGCTGCTTTGTTGAGTGAAGGCAGTAAGAATGTTCCAAATTTGATGCTGCAAGATGTTATCCCTCTGTCACTTGGTATCTTAACTTACGGAGATATCATGAGTGTGCTGATTCCTAGGAATACTTCTGTACCGTTCAAGAAGACACGGGGTTATGCAACAGCTTCAGATAACCAATCTTCAGTCCCAATTAAGGTTTACGAGGGTGAAAGAGTTATTGCAACCGAGAACAACTTGCTTGGTTTGTTTGATCTCAATGTTCGACTAGCTCCTCGGGGGCTTCCTCTCAAAGTATGCTTTACTATAGATGCAGATGGTATATTAAACGTCTCGGCAGAGGAAGAAATCAGTGGTAATAAAAATGATATTACTATAACGAATGAAAATGGTAGGCTGTCAAAAGAAGAGATTGAGAGAATGATCCAGGAGGCTGTGAATTTCAAGGCGCAAGACATGATGTTCAAAAAGAAAGTTGAAGCAAGAAATGCTTTGGAAGATTATCTTTACAATGTGAGGAAAGTAATGAAGGATGATTGTGTAAGTTCTGAGCTCACATCTGTAGACAAAGTGAAGCTCAATTCTGCAATGATTAAGGGAAAGAGCTTGATTGATGACAACCAGCAGGAAGATAGGTCTGTGTTTATAGACTTTTTGAAGGAGCTTGAGAGCGTCTTTGAATCTGCTATGAACAAGATCAACAAAAGTTACTTAGATGAGGAAAGTGATTAG 1908 0.4072 MAKKYEGVAIGIDLGTTYSCVGVWQEQNDRVEIIHNDQGNKTTPSCVAFTNTQRLIGDAAKNQASSNPTNTVFDAKRLIGRKYSDSVIQSDILLWPFKVIADDNDKPMILVSYKGEEKHLVAEEISAMILTQMREIAGAFLESPVKNAVITVPAYFNDSQRRATKDAGDIAGLNVIRIINEPTAAALAYGLQKRANCVEERTIFIFDLGGGTFDVSLLTIRNNVFEVKATAGDTHLGGEDFDNRILNHFVKEFKRKNKVDISGNSKALRRLRTVCERAKRTLSYDTEATIDIDAIYEGIDFCSSITRAKFEQLNMDLFEKCMQTVENCLVDSKIDKSSVDDIVLVGGSSRIPKVKQLLQDFFKGKELCKSINPDEAVAYGAAVQAALLSEGTVQAALLSEGSKNVPNLMLQDVIPLSLGILTYGDIMSVLIPRNTSVPFKKTRGYATASDNQSSVPIKVYEGERVIATENNLLGLFDLNVRLAPRGLPLKVCFTIDADGILNVSAEEEISGNKNDITITNENGRLSKEEIERMIQEAVNFKAQDMMFKKKVEARNALEDYLYNVRKVMKDDCVSSELTSVDKVKLNSAMIKGKSLIDDNQQEDRSVFIDFLKELESVFESAMNKINKSYLDEESD* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4063 635 SUPERFAMILY Actin-like ATPase domain 200 388 IPR043129 -
Psa3g4063 635 Gene3D Actin; Chain A, domain 4 237 320 - -
Psa3g4063 635 PANTHER HEAT SHOCK PROTEIN 70KDA 4 626 IPR013126 GO:0005524|GO:0140662
Psa3g4063 635 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 552 626 IPR029048 -
Psa3g4063 635 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Psa3g4063 635 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Psa3g4063 635 Gene3D - 73 128 - -
Psa3g4063 635 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Psa3g4063 635 Pfam Hsp70 protein 9 625 IPR013126 GO:0005524|GO:0140662
Psa3g4063 635 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 626 - -
Psa3g4063 635 Gene3D - 555 628 IPR029048 -
Psa3g4063 635 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 404 558 IPR029047 -
Psa3g4063 635 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 402 554 IPR029047 -
Psa3g4063 635 PRINTS 70kDa heat shock protein signature 8 21 - -
Psa3g4063 635 PRINTS 70kDa heat shock protein signature 38 50 - -
Psa3g4063 635 PRINTS 70kDa heat shock protein signature 60 68 - -
Psa3g4063 635 PRINTS 70kDa heat shock protein signature 148 168 - -
Psa3g4063 635 PRINTS 70kDa heat shock protein signature 211 221 - -
Psa3g4063 635 PRINTS 70kDa heat shock protein signature 339 355 - -
Psa3g4063 635 PRINTS 70kDa heat shock protein signature 371 391 - -
Psa3g4063 635 PRINTS 70kDa heat shock protein signature 486 502 - -
Psa3g4063 635 Gene3D - 10 386 - -
Psa3g4063 635 Gene3D - 194 368 - -
Psa3g4063 635 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4063 Psa-Chr3 379780724 379782869 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4063 1 617 Calmodulin-binding Proteins AT3G12580 66.721 0.0 843