Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4061 ATGATTGTTGTTCAATACAAGGGTGAAGAGAAACACTTTTGTGCTGAGGAAATATCATCTATGGTCCTCAGAAAGATGCGTGAAGTTGCAGAGAAATTTGTAGAGTTCCCGGTAAAGAATGTTGTTGTTACTGTGCCGGCTTATTTCAATGATTCTCAACGAAAAGCCACCATAGATGCCGGTGCCATGGCTGGCCTTAATGTTATACGGATGATTAATGAACCAACAGCTGCTGCTCTTGCATATGGCCTTAACAAGAGAACAAAATGTGCTGGTGAAAACAATATTTTTGTCTTTGATCTTGGTGGTGGCACTTTCGATGCGTCTGCCCTAACAATAAAAGACAATGTCTTTCAAGTTAAGGCCACTGCCGGAAACACTCACCTAGGAGGAGAAGATTTTGATAACAGAATGGTCAACTACTTTGTAGAAGAACTAAAGAGAAAGAACAAAATTGATATTAGTGGTAATCCAAAATCCTTGAGGAGGTTGAGAACTGCATGTGAAAGGGCAAAAAGGACGCTCTCGTTTGTTTCTGTCACCACTATTGAGGTAGACTATTTATTCCAAGGCTTCGACTTTTCTTCGTCGATAACTCGTGCCAAGTTTGAAGAAATCAGTGCAGACCTTTTTAAAGAGTGTATGGAGATCGTCAAGAGTTGTCTTGTGGATGCTGGGATGAATAAGAGTAATGTAAATGATGTTGTGATTGTTGGCGGGTCTTCTAGGATTCCCAAAGTGCAACAACTATTGCAGGAATATTTCAACGGAAAGGATCTGTGCATGAGTATCAACCCTGATGAGGCAGTTGCTTATGGAGCCGCTGTACAGGCTGCTTTGTTGAGTAAAGGCTTTCAAAATGTTCCAAACTTGGTGCTCCGTGATGTTGCACCATTGTCTCTTGGTATGGTAACAATAGGAGATGTCATGAGTGTGGTGATTCCTAGGAACACTTGCATTCCCGTCAAGATTACAAAAAGTTTTTTAACAGTGAAAGATAATCAATCTCAAGTCTTGATTGAGGTTTATGAGGGTGAAAGAACTAGAGCCAGTGATAACAATTTGCTCGGTTCTTTTACTCTTTCAGGTATTCCTCCTTCACCTCGCGGCTATAGTTTCAATGTATGTTTTGCTATAGATGAAAATGGTATTTTGACTGTTTCTGCTACGGATAACTCCACCGGCAATATATACTGA 1197 0.4052 MIVVQYKGEEKHFCAEEISSMVLRKMREVAEKFVEFPVKNVVVTVPAYFNDSQRKATIDAGAMAGLNVIRMINEPTAAALAYGLNKRTKCAGENNIFVFDLGGGTFDASALTIKDNVFQVKATAGNTHLGGEDFDNRMVNYFVEELKRKNKIDISGNPKSLRRLRTACERAKRTLSFVSVTTIEVDYLFQGFDFSSSITRAKFEEISADLFKECMEIVKSCLVDAGMNKSNVNDVVIVGGSSRIPKVQQLLQEYFNGKDLCMSINPDEAVAYGAAVQAALLSKGFQNVPNLVLRDVAPLSLGMVTIGDVMSVVIPRNTCIPVKITKSFLTVKDNQSQVLIEVYEGERTRASDNNLLGSFTLSGIPPSPRGYSFNVCFAIDENGILTVSATDNSTGNIY* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4061 398 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 396 - -
Psa3g4061 398 PANTHER HEAT SHOCK PROTEIN 70KDA 1 396 IPR013126 GO:0005524|GO:0140662
Psa3g4061 398 SUPERFAMILY Actin-like ATPase domain 92 282 IPR043129 -
Psa3g4061 398 Gene3D - 2 21 - -
Psa3g4061 398 Gene3D - 22 279 - -
Psa3g4061 398 ProSitePatterns Heat shock hsp70 proteins family signature 3. 235 249 IPR018181 -
Psa3g4061 398 PRINTS 70kDa heat shock protein signature 41 61 - -
Psa3g4061 398 PRINTS 70kDa heat shock protein signature 104 114 - -
Psa3g4061 398 PRINTS 70kDa heat shock protein signature 232 248 - -
Psa3g4061 398 PRINTS 70kDa heat shock protein signature 264 284 - -
Psa3g4061 398 PRINTS 70kDa heat shock protein signature 290 309 - -
Psa3g4061 398 PRINTS 70kDa heat shock protein signature 370 386 - -
Psa3g4061 398 Gene3D Actin; Chain A, domain 4 131 213 - -
Psa3g4061 398 Gene3D - 87 261 - -
Psa3g4061 398 SUPERFAMILY Actin-like ATPase domain 2 86 IPR043129 -
Psa3g4061 398 Pfam Hsp70 protein 3 395 IPR013126 GO:0005524|GO:0140662
Psa3g4061 398 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 287 396 IPR029047 -
Psa3g4061 398 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 282 397 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4061 Psa-Chr3 379690851 379692317 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4061 1 395 Calmodulin-binding Proteins AT3G12580 69.521 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4061 K03283 - gmx:102667578 594.734