Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4059 ATGGAGAAAATAATAAGGTTTGTGTTTATGGTTATGGTTTTTATGATGTTATCAAGTGGAGAAGGGCAATTAGTAGAGAATTTCTACATTTCAAGTTGTCCTAATGTAGAACTGTTGGTGTCTCAAGCAGTGACAAACAAGTTTACTCAGACAATTACTACTGGACAAGCAACTCTTCGTCTCTTTTTGCATGATTGCTTTGTTGAGGGATGTGATGCATCAATTATGATAGCTTCACCAAACGGAGATGCAGAAAGAGATGCAAAAGAAAATCTTTCACTACCAGGAGATGGATTTGACACTGTGATTAAAGCAAAAGAAGCAGTCGAAGCTTTTTGCCCAGGAGTTGTTTCATGTGCAGACATTTTAGCACTTGCCACTAGAGACGTTATAGTGCTGCTAGGACGCAGAGACGGACTTATTTCAAAAGCATCAACTGTAGAAGCAAATCTTCCAAAACCAACTTTCAATCTTAATCAATTAAACACAATTTTCTCCAAACACAACCTAAGCCAAACCGACATGATTGCACTCTCAGGAGCACACACGGTTGGATTCTCACATTGTGACCAATTCACAGATCGTTTATACTCATCTCAAGTGGACCCCACATTGAACCCTAGCTACGCACAAGAATTAATTGCAGGGTGCCCTAGAAATGTTGATCCATCTATTGTGCTTCCTCTTGATCCTCAAACTCAATTTGTTTTTGATAATATTTATTACCAAAACTTGGTTAATGGAAAAGGGTTATTAACTTCTGATCAAGTTTTGTTCAATGATGATGCTTCAAAGTCTAAAGTTGTTGAGTTTGCTAATGATGGTGCTAAGTTCTTTGATGCATTTGTAGTAGCTATTAAGAAGCTTGGAAGGGTTGGGGTAAAGACGGGTAAAGAGGGAGAGATTAGGAGAGATTGTTCTAAATTTAATTAG 933 0.3783 MEKIIRFVFMVMVFMMLSSGEGQLVENFYISSCPNVELLVSQAVTNKFTQTITTGQATLRLFLHDCFVEGCDASIMIASPNGDAERDAKENLSLPGDGFDTVIKAKEAVEAFCPGVVSCADILALATRDVIVLLGRRDGLISKASTVEANLPKPTFNLNQLNTIFSKHNLSQTDMIALSGAHTVGFSHCDQFTDRLYSSQVDPTLNPSYAQELIAGCPRNVDPSIVLPLDPQTQFVFDNIYYQNLVNGKGLLTSDQVLFNDDASKSKVVEFANDGAKFFDAFVVAIKKLGRVGVKTGKEGEIRRDCSKFN* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4059 310 CDD secretory_peroxidase 23 309 IPR033905 GO:0004601|GO:0042744
Psa3g4059 310 Gene3D Peroxidase, domain 2 152 289 - -
Psa3g4059 310 Pfam Peroxidase 41 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g4059 310 ProSitePatterns Peroxidases proximal heme-ligand signature. 174 184 IPR019793 -
Psa3g4059 310 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g4059 310 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g4059 310 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g4059 310 PRINTS Plant peroxidase signature 173 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g4059 310 PRINTS Plant peroxidase signature 228 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g4059 310 PRINTS Plant peroxidase signature 244 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g4059 310 PRINTS Plant peroxidase signature 284 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g4059 310 PANTHER - 8 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g4059 310 PANTHER PEROXIDASE 55 8 310 - -
Psa3g4059 310 ProSiteProfiles Plant heme peroxidase family profile. 23 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g4059 310 SUPERFAMILY Heme-dependent peroxidases 23 310 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa3g4059 310 Gene3D - 27 310 - -
Psa3g4059 310 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g4059 310 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g4059 310 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g4059 310 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4059 Psa-Chr3 379587386 379590764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4059 4 310 Peroxidase AT5G14130 57.812 8.95e-130 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4059 K00430 - gmx:100791275 470.314