Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4052 ATGATTCTCACACAGATGCAAGAGATTGTCGGAGCATTTTTGGAGTCTCCTGTTAAGAATGTAGTGATTACCGTACCTGCTTATTTTAATGATTCGCAGCGAAGAGCCACCAAAGACGCAGGTGATATTGCTGGTCTCAATGTTATGAGGATAATCAATGAGCCAACTGCGGCGGCTCTTGCATATGGACTTCAAAAGAGAGCTAATTGTGTTGAAGAGAGAACTATCTTCATCTTTGATCTTGGTGGAGGAACTTTTGACGTGTCTCTCCTTACTATTAGGAATAACGTCTTTGAAGTCAAGGCCACTGTTGGAGATACTCATCTTGGAGGAGAAGACTTTGATGATCGGATATTGAATCACTTTGTGAAGGAGTTTAAGAGGAAGAATAAAGTTGACATTAGTGGGAACTCAAAAGCTCTGAGGAGATTGAGAACTGTCTATGAGAGGGCAAAAAGGACATTGTCATATGATACTGAGGCCACAATTGACATAGATGCTATATATGAGGGAATTGACTTCTGTTCATCAATTACTCGGGCCAAGTTTGAGCAATTAAATATGGACTTGTTTGAAAAGTGTATGCAGAATGTTGAAAACTGTCTTGTTGATTCTAAGATAGACAAGAGTAGTGTTGATGACATTGTTCTGGTTGGTGGCTCTTCTAGGATACCCAAAGGGAAGCAACTATTGCAGGAGTTTTTCAAGGGGAAGGAACTATGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTACAAGCTGCTTTGCTGAGTGAAGGTTTTAAGAATGTTCCAAATTTGATGTTGCAAGATGTTATCCCTCTGTCACTTGGTATCTCAACTTACGGAGATATCATGAGTGTGCTGATTCCTAGGAATACTTCTATTCCTGTCAAAAATACCAAACCTTATGTTACTGGGGTAGATAACCAACACCGCATGTTGATTGAAGTTTATGAAG 973 0.4039 MILTQMQEIVGAFLESPVKNVVITVPAYFNDSQRRATKDAGDIAGLNVMRIINEPTAAALAYGLQKRANCVEERTIFIFDLGGGTFDVSLLTIRNNVFEVKATVGDTHLGGEDFDDRILNHFVKEFKRKNKVDISGNSKALRRLRTVYERAKRTLSYDTEATIDIDAIYEGIDFCSSITRAKFEQLNMDLFEKCMQNVENCLVDSKIDKSSVDDIVLVGGSSRIPKGKQLLQEFFKGKELCKSINPDEAVAYGAAVQAALLSEGFKNVPNLMLQDVIPLSLGISTYGDIMSVLIPRNTSIPVKNTKPYVTGVDNQHRMLIEVYE 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4052 324 ProSitePatterns Heat shock hsp70 proteins family signature 2. 78 91 IPR018181 -
Psa3g4052 324 PANTHER HEAT SHOCK PROTEIN 70KDA 1 324 IPR013126 GO:0005524|GO:0140662
Psa3g4052 324 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 267 324 IPR029047 -
Psa3g4052 324 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 262 324 IPR029047 -
Psa3g4052 324 Gene3D - 76 156 - -
Psa3g4052 324 PRINTS 70kDa heat shock protein signature 21 41 - -
Psa3g4052 324 PRINTS 70kDa heat shock protein signature 84 94 - -
Psa3g4052 324 PRINTS 70kDa heat shock protein signature 212 228 - -
Psa3g4052 324 PRINTS 70kDa heat shock protein signature 244 264 - -
Psa3g4052 324 PRINTS 70kDa heat shock protein signature 270 289 - -
Psa3g4052 324 SUPERFAMILY Actin-like ATPase domain 72 262 IPR043129 -
Psa3g4052 324 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 324 - -
Psa3g4052 324 Pfam Hsp70 protein 1 324 IPR013126 GO:0005524|GO:0140662
Psa3g4052 324 Gene3D - 1 75 - -
Psa3g4052 324 SUPERFAMILY Actin-like ATPase domain 1 66 IPR043129 -
Psa3g4052 324 Gene3D - 159 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4052 Psa-Chr3 379115930 379116902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4052 1 324 Calmodulin-binding Proteins AT3G12580 70.769 1.63e-166 476