Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4050 ATGCCCAAAAAGCATGAGGGGCTTGCAATAGGAATTGACGTAGGTACGACGTACTCATGTGTTGGAGTGTGGCAAGAACAAAAGGACCGTGTTGAAATCATTCACAATGATCAAGGAAACAAAACATCACCTTCTTGTGTTGCTTTTACCAACACTCAAAGATTGATTGGTGATGCTGCCAAAAATCAAGCTTCCTCTAACCCAACCAACACTGTATTTGATGTAAAGAGGCTGATCGGAAGGAAATATACAGATTCTGTTATTCAGAATGATATTTTACTGTGGCCCTTTAAGGTCATTGCTGGGGATAATGACAAACCGATAATCCTAGTGAGCTACAAGGGTAAGGAAAAACACCTTGTTGCTGAGGAAATATCAGCCATGATTCTCACACAGATGCGAGAGATTGCCGGGGCATTTTTGGAGTCTCCTGTTAAGAATGCAGTGATTACCGTACCTGCTTATTTTAATGATTCGCAGCGAAGAGCCACCAAAGATGCAGGTGATATTGCTGGTCTCAATGTTATGAGGATAATCAATGAGCCAACTGCGGCGGCTCTTGCATATGGCCTTCAAAAGAGAGCTGATTGTGTTGAAGAGAGAACTATTTTCATCTTTGATCTTGGTGGCGGGACTTTTGATGTGTCTCTCCTTACAATTAAGAATAATTCCTTTGAAGTCAAGGCCACTGCTGGTGACACTCACCTCGGAGGAGAGGACTTTGATGTTAGGATTGAAGAATAA 744 0.422 MPKKHEGLAIGIDVGTTYSCVGVWQEQKDRVEIIHNDQGNKTSPSCVAFTNTQRLIGDAAKNQASSNPTNTVFDVKRLIGRKYTDSVIQNDILLWPFKVIAGDNDKPIILVSYKGKEKHLVAEEISAMILTQMREIAGAFLESPVKNAVITVPAYFNDSQRRATKDAGDIAGLNVMRIINEPTAAALAYGLQKRADCVEERTIFIFDLGGGTFDVSLLTIKNNSFEVKATAGDTHLGGEDFDVRIEE* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4050 247 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 245 - -
Psa3g4050 247 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Psa3g4050 247 Gene3D - 202 247 - -
Psa3g4050 247 PANTHER HEAT SHOCK PROTEIN 70KDA 4 245 IPR013126 GO:0005524|GO:0140662
Psa3g4050 247 Gene3D - 73 124 - -
Psa3g4050 247 PRINTS 70kDa heat shock protein signature 8 21 - -
Psa3g4050 247 PRINTS 70kDa heat shock protein signature 38 50 - -
Psa3g4050 247 PRINTS 70kDa heat shock protein signature 60 68 - -
Psa3g4050 247 PRINTS 70kDa heat shock protein signature 148 168 - -
Psa3g4050 247 PRINTS 70kDa heat shock protein signature 211 221 - -
Psa3g4050 247 Pfam Hsp70 protein 9 246 IPR013126 GO:0005524|GO:0140662
Psa3g4050 247 SUPERFAMILY Actin-like ATPase domain 199 246 IPR043129 -
Psa3g4050 247 Gene3D - 5 201 - -
Psa3g4050 247 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4050 Psa-Chr3 379086776 379087761 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4050 1 245 Calmodulin-binding Proteins AT5G02500 72.245 7.21e-127 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4050 K03283 - gmx:102667578 390.963