Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4048 ATGGCAAAGAAATATGAGGGAGTTGCTATAGGAATTGACCTTGGCACCACTTACTCCTGTGTTGCCAAGGAAACGATCGTGTGGAAATCATTCACAATGATCAAGGAAACAAAACAACACCACGATCGTGTGGAAATCATTCACAATGATCAAGGAAACAAAACAACACCTTCTTGTGTTGCTTTCACTCATTCTCAAAGATTGATAGGTGATGCGGAGGAAGAAATTGGTGGTAATAAGAAAGATATTTACAATAACTAA 261 0.3831 MAKKYEGVAIGIDLGTTYSCVAKETIVWKSFTMIKETKQHHDRVEIIHNDQGNKTTPSCVAFTHSQRLIGDAEEEIGGNKKDIYNN* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4048 86 Gene3D - 1 82 - -
Psa3g4048 86 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 74 - -
Psa3g4048 86 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Psa3g4048 86 Pfam Hsp70 protein 9 72 IPR013126 GO:0005524|GO:0140662
Psa3g4048 86 PANTHER HEAT SHOCK PROTEIN 70KDA 4 74 IPR013126 GO:0005524|GO:0140662
Psa3g4048 86 SUPERFAMILY Actin-like ATPase domain 8 72 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4048 Psa-Chr3 378909242 378909502 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4048 1 72 Calmodulin-binding Proteins AT5G02490 65.278 1.03e-22 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4048 K03283 - gmx:102667578 92.8189