Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4046 ATGGCCAAAAATTATGAGGGTCCTGCTATCGGAATTGATCTTGGCACAACCTATTCATGTGTTGCTGTATGGAATGATCAAAACAACAGAGCTGAGATTATACACAATGATCAAGGTAACAACACGACGCCTTCTTTTGTAGCTTTCACTGACTCTCAAAGGTTGGTTGGTGATTCTGCCCATAATCAAGCTGCTTCAAACCCTGCCAACACTATCTTCGATGCAAAGAGGTTGATTGGAAGGAAATACAGTGATTCTGTTATTCAGAACGACATGCAATTGTGGCCATTTAAGGTTGTTGCTGGAAATGACGACAACCCCGTGGTTGTTGTTCATTTCAAGAATGAAGAAAAGTGTTTTGTTGCCGAGGAAATTTCATCGATGATTCTCATGAAAATGCGGGAGATTGCGGAGAAATTTTTAGAATCAGAAGTTACAAATGCAGTGATTACTGTGCCAGCTTATTTCAATGATTCTCAGCGAAAAGCCACCAAAGATGCTGGTGCCATAGCTGGACTCAATGTGATAAGGATACTCAATGAACCAACCGCTGCTGCTCTTGCATATGGGCTTCAGAAGCGAGCCAATTGTGTTGAAGAGAGAAATATTTTAGTATTTGATCTCGGTGGTGGAACTTTTGATGTGTCTCTTCTCACAGTTAAAAACAATGCCTTTGATGTCAAGGCAACTGCTGGTGATACTCACCTTGGAGGAGAGGACTTTGATAACCGAATGGTGAATCACTTTGTGAAGGAGTTCAAGAGGAAGAACAAAATTGACATTAGTGAGAACCCAAAAGCCTTGAGAAGGATGAGAACATCTTGTGAAAGGGCAAAGAGAACACTTTCATTTGATACCATGGCCAGTGTCGAGATAGATGCCATAAGTCAAGGTAAAGACTTTCGTTCATCCATTAGTCGAGCCAAGTTTGAGCAACTCAACATGGACCTCTTTGCAAAGTGTATCACGACAGTTGAGAGTTGTCTCATTGATGCTGTGATGGAAAAGAGTAGTGTTCATGATGTTGTCCTTGTTGGTGGCTCGTCTCGGATTCCCAAAGTTCAGCAACTACTACAAGACTTTTTTAATGGAATTGATCTGTGTATGAGCATCAACCCTGACGAAGCTGTCGCGTACGGTGCAGCCGCTTTGGCTGCATCGTATAGCAAAGGCTTTAAGAATGATATTCAAAATTTTGTGCTGCGTGAAGTTACACCACTGTCTTTAGGTATATTGACAAATGAAGATACCATGAGTGTGGTTATTCCTAGGAATACTGCCATTCCAACAAGAAAGAAAAAAGTATACTTCACTAGGAAACATTCCAAACCCTCTGCTTTGATCAAAATTTATGAGGGTGAGAGGACAAGAGCAAGTGATAACAACTTATTGGGTTTGTTTACGATTCGCGGCTTCCCTGGTGACGGTCGGAGTTTCCCTTTTAATGTCTATTTTGAAGTTGATGATGATGGAATCTTAACTGTATGTGCTGAAGAAGAAACTACTGGAAATAAGAATGAGATTACCATAACCAATGACAAAGGAAGACTATCGACTGAACAAATTATGAAAATGGTTGAGGCAGCTGAGAAATACAAGGCTGAAGATAAGATGTATCAGAAGAAAGTTACTGCCATGAATGCTTTGGAAGATTATGTTGATGAGATAATGAATGCTTTAGAAGATAGTGACGCAAGTGTCAATCTTTGTCGATTAGATAAAAAGAAGATCAATTTGGCAATTAGAGATGCAAGAAACTTACTTGATAATAGCCAGCAGAAAGAGGCAGAATCGTTTGAGGATTATTTGAAGAAGTTAGAGTGCATGGTAGGACCTGTTCTCAAGATTGACTAG 1854 0.4018 MAKNYEGPAIGIDLGTTYSCVAVWNDQNNRAEIIHNDQGNNTTPSFVAFTDSQRLVGDSAHNQAASNPANTIFDAKRLIGRKYSDSVIQNDMQLWPFKVVAGNDDNPVVVVHFKNEEKCFVAEEISSMILMKMREIAEKFLESEVTNAVITVPAYFNDSQRKATKDAGAIAGLNVIRILNEPTAAALAYGLQKRANCVEERNILVFDLGGGTFDVSLLTVKNNAFDVKATAGDTHLGGEDFDNRMVNHFVKEFKRKNKIDISENPKALRRMRTSCERAKRTLSFDTMASVEIDAISQGKDFRSSISRAKFEQLNMDLFAKCITTVESCLIDAVMEKSSVHDVVLVGGSSRIPKVQQLLQDFFNGIDLCMSINPDEAVAYGAAALAASYSKGFKNDIQNFVLREVTPLSLGILTNEDTMSVVIPRNTAIPTRKKKVYFTRKHSKPSALIKIYEGERTRASDNNLLGLFTIRGFPGDGRSFPFNVYFEVDDDGILTVCAEEETTGNKNEITITNDKGRLSTEQIMKMVEAAEKYKAEDKMYQKKVTAMNALEDYVDEIMNALEDSDASVNLCRLDKKKINLAIRDARNLLDNSQQKEAESFEDYLKKLECMVGPVLKID* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4046 617 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 612 - -
Psa3g4046 617 PANTHER HEAT SHOCK PROTEIN 70KDA 4 612 IPR013126 GO:0005524|GO:0140662
Psa3g4046 617 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 545 614 IPR029048 -
Psa3g4046 617 Gene3D - 10 385 - -
Psa3g4046 617 PRINTS 70kDa heat shock protein signature 8 21 - -
Psa3g4046 617 PRINTS 70kDa heat shock protein signature 38 50 - -
Psa3g4046 617 PRINTS 70kDa heat shock protein signature 60 68 - -
Psa3g4046 617 PRINTS 70kDa heat shock protein signature 148 168 - -
Psa3g4046 617 PRINTS 70kDa heat shock protein signature 211 221 - -
Psa3g4046 617 PRINTS 70kDa heat shock protein signature 339 355 - -
Psa3g4046 617 PRINTS 70kDa heat shock protein signature 371 391 - -
Psa3g4046 617 PRINTS 70kDa heat shock protein signature 398 417 - -
Psa3g4046 617 PRINTS 70kDa heat shock protein signature 478 494 - -
Psa3g4046 617 Gene3D - 546 616 IPR029048 -
Psa3g4046 617 Gene3D - 194 368 - -
Psa3g4046 617 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Psa3g4046 617 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Psa3g4046 617 Gene3D Actin; Chain A, domain 4 237 320 - -
Psa3g4046 617 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Psa3g4046 617 Pfam Hsp70 protein 9 609 IPR013126 GO:0005524|GO:0140662
Psa3g4046 617 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 395 550 IPR029047 -
Psa3g4046 617 SUPERFAMILY Actin-like ATPase domain 199 388 IPR043129 -
Psa3g4046 617 Gene3D - 73 128 - -
Psa3g4046 617 Coils Coil 574 594 - -
Psa3g4046 617 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Psa3g4046 617 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 393 545 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4046 Psa-Chr3 378750450 378752853 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4046 1 614 Calmodulin-binding Proteins AT3G12580 63.902 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4046 K03283 - gmx:102667578 792.341