Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4040 ATGAGGCTGCAGGACTTCAGTTTCGAGGACAAAATATGGCTAGCTGCAATAGAGGAATTAATGTCTCAAGGAATGCATAATGCCGAACAGGCCCTTCTCTCTGGATGTTCTGCGGGTGGCCTTGCATCCATACTACATTGTGATGAGTTCCAGAACTTGTTACCAAAATCTTGCAAAGTGAAGTGTCGTAGTGATGCAGGATTTTTTCTAGATGCAATTGATGTATCTGGAGGACGCACATTGAGAAATCTGTTCGGAGGCGTAGTTCAGTTACAGGAAATACAAAAAAATCTTCCAAAGAATTGTCTCAACAAACTGGACCCAACTTCGTGCTTCTTTCCTCAGAATTTGGTTGAACATGTTGAGACACCGTTGTTTCTACTCAACACGGCTTATGATGTGTGGCAGGTTCAAGCAAGTTTAGCCCCAGTGACAACCGATCCTCTTGGCTCTTGGAATGACTGCAAATCAAACCATGCAAATTGTAGCTCGTCTCAAATTCAGCTCCTCCAAGACTTCAGAAATCAATAG 531 0.4313 MRLQDFSFEDKIWLAAIEELMSQGMHNAEQALLSGCSAGGLASILHCDEFQNLLPKSCKVKCRSDAGFFLDAIDVSGGRTLRNLFGGVVQLQEIQKNLPKNCLNKLDPTSCFFPQNLVEHVETPLFLLNTAYDVWQVQASLAPVTTDPLGSWNDCKSNHANCSSSQIQLLQDFRNQ* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4040 176 PANTHER PECTIN ACETYLESTERASE 10 176 - -
Psa3g4040 176 PANTHER NOTUM-RELATED 10 176 IPR004963 GO:0016787
Psa3g4040 176 Pfam Pectinacetylesterase 10 176 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4040 Psa-Chr3 376691249 376691779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4040 11 176 Carbohydrate Esterase AT1G57590 68.072 4.76e-83 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4040 K19882 - gmx:100786972 293.893