Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4026 GGCATGAATTTGCACCTCCTTCATGTCTAAGCAGCAACTTAACTACTTCCGATGAAACCGATGAACTTCAATTCAACAACGTGCTTGATGAAAGGAAGCACCGAGGAATGATATCGAATAGAGAATCAGCCAGGAGATCAAGGATTAGGAAACAAAAACACTTAGATGAACTCTGGTCGCAAGTGGTGAGACTTAGAACTAAGAATCATAATCTTGTTGACAAACTCAATCATGTTTCTGAGTCATATGACAAAGTTGTTCTAGAAAATGCAAGACTTAAGAAGGAGACTTTCAATCTTCGCCAAATGGTAGCTGATATGTAA 323 0.387 HEFAPPSCLSSNLTTSDETDELQFNNVLDERKHRGMISNRESARRSRIRKQKHLDELWSQVVRLRTKNHNLVDKLNHVSESYDKVVLENARLKKETFNLRQMVADM* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4026 106 SUPERFAMILY Leucine zipper domain 31 82 IPR046347 GO:0003700|GO:0006355
Psa3g4026 106 PANTHER BZIP PROTEIN (ATBZIP48) 4 106 - -
Psa3g4026 106 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 4 106 IPR044521 -
Psa3g4026 106 CDD bZIP_plant_GBF1 32 83 IPR045314 GO:0003700|GO:0006355
Psa3g4026 106 Pfam bZIP transcription factor 31 85 IPR004827 GO:0003700|GO:0006355
Psa3g4026 106 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Psa3g4026 106 Gene3D - 29 86 - -
Psa3g4026 106 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Psa3g4026 106 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4026 Psa-Chr3 373597509 373597831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4026 8 106 bZIP Transcription Factor Family AT3G30530 67.000 7.68e-42 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa3g4026 bZIP_1 1.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4026 - - gmx:778126 162.925