Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4025 ATGATGAATTCACTTTGTGGAAGCTCAAATTCCATCAAAGAAAAATGTGTTCAACCAAATTCTTCAAAGAAAAATGTCACAAATTCTTGTGATGATTTAGATCAAATTACTAGTATTCTAACCCCACAAAGCTTAAACCTACCATCACTCAAATTTGACTTAGATGGTGATGTCGAAGTCCAATCGCCAGATAGTTCAATGTGGGAATCATTTTTCAATGACCATTTAGATAATGATTTCATGATATCATCCCCTATTAGGAACAACATTAACCCTAATTCACCACAACCTTCTAACTGTAATAATAATAACTATGTTCAAGGAATGCAAATTCAAACCTTTTCACCACCTCGTTTAAATAGTTATAATAATAATCAACAAAAAGGAAAAGGACTTAGTCCACTTCATAGAGTTTTCAATTCACCAAACAATCAATACATGCAACATGTTGAAAATCTTTCATTGCCAGCAATTGAAGAGTTCTTAGAAGATTATCAAGTTGATGTTGATTTTTCATCAACTAAGGCTATTTCTTCTAATGATCAATGTTTTGACATGGAGACACCAATTTCGACAATTTTGGATAGTTTAACAATGCAGAATTCCTCTTCAAGGTATTGTGGTTCTGTGAGCGAAGAATCTTCTGTTATGCATGGTGGTGGATCTTCTCAAGTGTCTCAAGAGAGTGACATGTATCATCAAATGGGATCTATGGCTAGTGCTTCACTTTCACAAGCTTTACAACAAGAAAGGTATCAAGAGAAACACCAAAAATTGCAAGCACAACAGCAAGGTCTAACCGTTCCTATTCCAATTGGAATTGAACAGGAGCAAGACAGTGGACTTCAACTGGTGCACTTGCTTCTAGCCTGTGCTGAAGCAGTTGCAAAAGAAGAATACATGCTAGCAAGAAGGTACCTACACCAGCTCAACAGAGTAGTAACACCACTAGGTGACTCCATGCAACGTGTAGCTTCATGTTTCACAGAATCTCTTAGTGCAAGACTCGCTGCAACCCTTACAACAAAGTCATCATCAATGAAAAAAATAACACCGCCATCTTCTTCATCTTCCTCATCATCAAGTTTCTCTACCTTTCCATCAAACGCTATGGAAGTCCTCAGGATCTACCAGATTGTCTACCAAGCTTGTCCTTACATAAAATTCGCTCACTTTACCGCTAACCAAGCAATTTTCGAGGCGTTTGAGGCTGAAGAGCGTGTCCATGTCATCGACCTTGATATCCTCCAGGGTTACCAGTGGCCTGCATTCATGCAGGCATTGGCTGCACGGTCCGGCGGTGCTCCGTTCCTCCGGATCACAGGTGTGGGGCCGTGCATTGAATCAGTTAGAGAAACCGGAAGATGTTTAACAGAGTTAGCTCATTCTCTTCGTATCCCATTTGAGTTCCACCCCGTTGGAGAACAACTTGAGGATCTTAAACCACACATGTTTAACCGCCGTGTAGGCGAGGCTTTAGCGGTTAACACAGTTAACCGCCTCCATCGTGTTCCTGGGAACCATCTCGGGAACCTGTTATCTATGATTAGAGACCAAGCACCGAACATCGTGACGCTGGTGGAGCAAGAAGCAAGCCATAACGGGCCATACTTTTTAGGCCGGTTTCTCGAGGCATTACATTACTACTCTGCCATCTTCGACTCTTTGGACGCGACATTCCCGATGGAGTCAGCACCTAGGGCAAAGGTGGAGCAGTATATCTTTGCACCAGAGATTCACAACATCGTGGCATGTGAAGGGGAGGAAAGGATAGAGAGACACGAGAGGTTGGAAAAATGGAGGAAGATAATGGAAGGGAAAGGGTTCAAAGGAGTAGCATTGAGTCCTAATGCGGTGACTCAGTCAAGAATATTGTTGGGTTTGTATTCATGTGATGGGTATAGGTTAACTGAGGATAAGGGTTGCTTGTTACTTGGGTGGCAAGATAGATCCATCATTGCTGCTTCTGCATGGCGCTGCTGA 1983 0.4196 MMNSLCGSSNSIKEKCVQPNSSKKNVTNSCDDLDQITSILTPQSLNLPSLKFDLDGDVEVQSPDSSMWESFFNDHLDNDFMISSPIRNNINPNSPQPSNCNNNNYVQGMQIQTFSPPRLNSYNNNQQKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDYQVDVDFSSTKAISSNDQCFDMETPISTILDSLTMQNSSSRYCGSVSEESSVMHGGGSSQVSQESDMYHQMGSMASASLSQALQQERYQEKHQKLQAQQQGLTVPIPIGIEQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHQLNRVVTPLGDSMQRVASCFTESLSARLAATLTTKSSSMKKITPPSSSSSSSSSFSTFPSNAMEVLRIYQIVYQACPYIKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARSGGAPFLRITGVGPCIESVRETGRCLTELAHSLRIPFEFHPVGEQLEDLKPHMFNRRVGEALAVNTVNRLHRVPGNHLGNLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPMESAPRAKVEQYIFAPEIHNIVACEGEERIERHERLEKWRKIMEGKGFKGVALSPNAVTQSRILLGLYSCDGYRLTEDKGCLLLGWQDRSIIAASAWRC* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4025 660 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 36 658 IPR005202 -
Psa3g4025 660 ProSiteProfiles GRAS family profile. 275 659 IPR005202 -
Psa3g4025 660 PANTHER GRAS FAMILY PROTEIN RAM1 36 658 - -
Psa3g4025 660 Pfam GRAS domain family 284 659 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4025 Psa-Chr3 373563352 373565812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4025 278 660 GRAS Transcription Factor Family AT1G66350 44.216 3.88e-98 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa3g4025 GRAS 1.9e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4025 - - gmx:100805039 917.916