Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4022 ATGGAGGATTATTGGAGCATGATTTGTTCTGAGAATGGAGAAAATCTTTTCAGTTATGATTTCAAGTTACTGAAAGATCCTTCTTCGTGCATTAACCACTTGTTGCTCATGTTCTTTGATTTATTCATGATGATAATGTTATCGAGCGTCATGTTCCTGAAGTTTTCCTCAAGACCCTTTTGGAGTCTAGTAAGATATACAAACTTGCAGCTAGTTTCTGCTATAACCAATGCCTCTCTTGGTTTGTTGCATTTATGCTTAGGAGTTTGGGTTTTAGAGGAGAAGTTAAGGAAAAACCACAATGTCTTTCCTCTTAACTGGTTGTTACTAGAACTCTTTCAAGGACTCACATGGTTGTTTGTAAGTTTAACTATAAGTCTTCATATAAAACAGCTCTCAAGAGTATGGTTGTGGCTGTTTTCTATTCACATGTTCTTTGTTTCTAGTATATTATGTGTTTTATCGATGTCGTATGCAATTCGAAGCAGAGAACTGTCCCTTGCAGCAACTTTAGATGTTATATCTTTTCCAGGAGCAATCTTGCTGATGTTATGCACTTACAAAGCATCTAAATGTGAAGATACTGTCAGAGACACTACTGAGAGCCTTTATGCTCCAATGAATTGTCAATTTAACTATGTTGTTCCTAATAACAATCTAACATTATTTTCCGAAGCTGGATTCTTTAGTAAGATATCGTTTTGGTGGTTGAATCCGTTGATGAAAAAGGGTCATGAGAAAACACTTCAGGACGAAGATATTCCAAAGTTACGAGAGTCTGAACGAGCAGAACGTTGTTATTTGTCATTCGTAGAACAAGTACACAGACAGAGAGAAAATGAACCATCGTCACGTTCATCAGTGTTATGGACAATCGTTTTATGTCACCGGAGAGACATTTTTATAACAGGATTCTTTGCTTTGATCAAGGTACTTGCTGTGTCTTGTGGTCCACTACTTCTGAATGCCTTTATATTGGTTTCTGAGGGTAATGAAAGTTTCAAATATGAAGGTTATATGTTAGTCATATCACTCTTCTTCATGAAAATCATAGAGTCCCTATCACAAAGACAATGGTATTTCCGAGGTAGAATTGTTGGGATGAAAGTTAGATCCCTACTTACTGCAAGCATTTATAAAAAAGTATTACGGCTATCTAGTTCTTCTAGATTGATTCACTCTAGTGGTGAGATAATGAATTATATGACTGTGGATGCTTATAGAATCGGAGAACTTCCATTCTGGTTTCACCAGACATGGACAACAATACTCCAATTGTGTATTGCGTTAGTAATTCTTTTCCGAGCAATTGGACTAGCAACAATAGCTTCATTGGTGGTTATAGTTCTCACCGTGCTTTGCAACACTCCAATAGCAAAGTTACAACACAAGTTTCAGAGCAAACTTATGGTGGCACAAGATGAGAGATTGAAGGCTAGTTCTGAGGCTCTCGTGAATATGAAAGTGCTAAAGCTATATGCATGGGAAAGCCATTTTAAAAATGCTATAGAAAAGTTAAGAAATGTGGAACTCAAATTGATATCTGCAGTGCAATTAAGTAAGGCGTACCTTCTCTTTCTCTTTTGGACCTCGCCGGTGTTGGTGTCTGCTGCTTCTTTTCTAGCATGTTACTTTCTTGAAGTTCCTTTGCATGCAAGTAATGTTTTCACTTTTGTGGCAACTTTACGCCTTGTTCAAGAGCCGATTACTGGTATCCCGGATGTAATTACGGTGATCATTCAAGCAAAAGTTGCATTTGCTCGGGTTCGTAATTTCCTCGAGGCACAAGAACTACAGAGTGCAGATTTCAAGAGCAGGTGCTTTAATGGCAACCTCAAAGGCTCGGTTTTAATAAAATCAGCCGACTTTTCATGGGAAGGTAATGTATCAAAGCCAACACTAAGAAACATAAATTTGGACGTTAAACACGGGCAAAAAGTGGCTATTTGTGGAGAAGTTGGCTCCGGAAAATCGACTCTTTTAGCAACAATTCTAGGAGAAGTTCCTAATACAAAGGGAACTATTGATGTTTATGGGAAGTTTGCGTATGTTTCTCAAACAGCATGGATACAAACAGGAACAATACGGGAAAATATTTTATTTGGATCCGAGTTTGACGATCAAATATATCAAGAAACACTTCAAAGGTCTTCACTGATAAAGGACCTTGAGTTGCTTCCTTATGGTGACCTCACCGAAATAGGCGAGAGAGGAGTTAATTTAAGTGGAGGTCAAAAGCAGCGAATTCAACTCGCCCGGGCTCTATATGAGAATGCTGACATATATCTCCTGGACGATCCATTTAGTGCTGTTGATGCACATACTACAAAAAGTTTGTTTAATGAATACATCATAGAAGGACTCAAAGGGAAAACTGTCTTACTCGTGACTCATCAAGTCGAATTTCTACCAGCATTTGATTCTGTTTTGTTGATGTCAGATGGGGTAATTCTACAAGCTGGTTCATATCAAGAGCTATTGACAACAAGCCAAGAATTCCAGGACCTTGTCAATGCTCACAAGGTTACTGCTAGTTCAAACCAGCTTGCGAATGTTACTTTTTCTCAAGCTTCAAGAGAGATTACTCAAGCTTTAGTGGAAAAGGAGTGTAAAGAATCAAATGGAAATCAATTAATTAAGCAAGAAGAAAGAGAGGAAGGAGACACAGGGTTGAAGCCTTACTTACAATATCTGAATAAGATGAAAGGCTACATTTTCTTCTTCGGGGCTTCGTTCTGTCACCTTATTTTTTTGGTTTCTCAGATACTGCAAAACTCGTGGATGGCTGCTAATGTTGATAATCCTCGTGTCAGCACGTTGCAGTTGATTTTAGTTTATTTCTGGATTGGAGCATCTTCAATACTTTTCATGTTGATCAGAAGTTCCTGTATAGTTGCTTTGGGTCTTCATTCTTCAAAATATATATTTTTACAGTTGATGAACTCCCTCTTTCGAGCACCGATGTCTTTTTATGACTCTACACCATTGGGAAGGATACTAAGTAGGGTTTCATCTGATCTGAGCATTATGGATCTTGACATGCCATTTAGCCTCCTTTTTTCGGTCGGAGCCACTATAAACTTTTATTCCGTTCTTATAGTTTTAGCAGTTGTCACTTGGCAAGTATTAATTGTGGTTATACCAATAGTATACATTACGATTCGTCTACAGAGTTACTACTTAGTCTCAGCCAAAGAAATGATGAGGATGTGTAGCACAACAAAATCCTATTTAGCTAATCATGTAGCTGAAACTGTTGCCGGAGCTGTGACAATAAGGGCTTTTGAGGAGGAAGATCGTTTTTCTAAGAAGAATCTTGATCTAATCGATATTAATGCTAGTACATTTTTTCATTGTTTTGCCTCAAATGAATGGTTGATCCAACGATTAGAAACAATGAGTGCGCTTGTTCTTTCTTCTGCAGCACTTTGCATGGTTATACTTCCACCAGGGACTTTCACCTCTGGATTTATCGGTCTGGCTCTGTCATATGGCCTTACACTAAATGCTTCCTTAGTATTTTCCATTAGAATCCAATGCAATCTCGCAGATCAAATAATATCGGTAGAGAGGCTAAATCAATATATGCATATACAAAGTGAGGCCGAAGAAATAATAGAAGACAACCGTCCTCCTTTGAATTGGCCAATTGCAGGCAAAGTAGAAATAAATGACTTGAAGATACGATATAGACCAGGTGGACCACTTGTACTTCATGGGATCACATGCACGTTTGAAGCAGGTCACAAGATTGGTATTGTCGGTAGAACAGGCAGCGGGAAGTCCACTCTTATTGGTACTTTATTTCGCCTCGTGGAACCAGAAGGAGGAAAAGTTGTAGTTGACGGCATAGACATCTCGTCTATTGGCCTTCATGATTTGAGGTCACGTTTTGGGATTATACCTCAAGATCCTACTCTTTTTAATGGGACAGTAAGATTTAATTTGGACCCTTTATCCCAACACACTGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAACTAAGAGAAGTTGTCCAAAAGAAAGAAGAGGGCTTAAACTCCTCGGTTGTTGAAGATGGATCAAACTGGAGTATGGGACAAAGACAGCTATTTTGTTTAGGGCGTGCTCTTTTAAGGAGAAGTAGGATACTGGTACTGGATGAAGCAACTGCATCGATTGATAATTCAACTGATACGATTCTACAGAAAACCATTAGAACGGAATTTGCAGATTGTACAGTGATCACAGTAGCACACAGAATACCAACCGTGATGGATTGCACTATGGTTCTTTCAATCAGTGATGGAAAGTTGGTGGAGTATGACGAGCCAATGAGCTTGATGATGAGAGAAGAATCGTTGTTCAGAAAGCTTGTTAAGGAATATTGGTCTCATTTTCAGTCTGCGGAATAG 4398 0.3865 MEDYWSMICSENGENLFSYDFKLLKDPSSCINHLLLMFFDLFMMIMLSSVMFLKFSSRPFWSLVRYTNLQLVSAITNASLGLLHLCLGVWVLEEKLRKNHNVFPLNWLLLELFQGLTWLFVSLTISLHIKQLSRVWLWLFSIHMFFVSSILCVLSMSYAIRSRELSLAATLDVISFPGAILLMLCTYKASKCEDTVRDTTESLYAPMNCQFNYVVPNNNLTLFSEAGFFSKISFWWLNPLMKKGHEKTLQDEDIPKLRESERAERCYLSFVEQVHRQRENEPSSRSSVLWTIVLCHRRDIFITGFFALIKVLAVSCGPLLLNAFILVSEGNESFKYEGYMLVISLFFMKIIESLSQRQWYFRGRIVGMKVRSLLTASIYKKVLRLSSSSRLIHSSGEIMNYMTVDAYRIGELPFWFHQTWTTILQLCIALVILFRAIGLATIASLVVIVLTVLCNTPIAKLQHKFQSKLMVAQDERLKASSEALVNMKVLKLYAWESHFKNAIEKLRNVELKLISAVQLSKAYLLFLFWTSPVLVSAASFLACYFLEVPLHASNVFTFVATLRLVQEPITGIPDVITVIIQAKVAFARVRNFLEAQELQSADFKSRCFNGNLKGSVLIKSADFSWEGNVSKPTLRNINLDVKHGQKVAICGEVGSGKSTLLATILGEVPNTKGTIDVYGKFAYVSQTAWIQTGTIRENILFGSEFDDQIYQETLQRSSLIKDLELLPYGDLTEIGERGVNLSGGQKQRIQLARALYENADIYLLDDPFSAVDAHTTKSLFNEYIIEGLKGKTVLLVTHQVEFLPAFDSVLLMSDGVILQAGSYQELLTTSQEFQDLVNAHKVTASSNQLANVTFSQASREITQALVEKECKESNGNQLIKQEEREEGDTGLKPYLQYLNKMKGYIFFFGASFCHLIFLVSQILQNSWMAANVDNPRVSTLQLILVYFWIGASSILFMLIRSSCIVALGLHSSKYIFLQLMNSLFRAPMSFYDSTPLGRILSRVSSDLSIMDLDMPFSLLFSVGATINFYSVLIVLAVVTWQVLIVVIPIVYITIRLQSYYLVSAKEMMRMCSTTKSYLANHVAETVAGAVTIRAFEEEDRFSKKNLDLIDINASTFFHCFASNEWLIQRLETMSALVLSSAALCMVILPPGTFTSGFIGLALSYGLTLNASLVFSIRIQCNLADQIISVERLNQYMHIQSEAEEIIEDNRPPLNWPIAGKVEINDLKIRYRPGGPLVLHGITCTFEAGHKIGIVGRTGSGKSTLIGTLFRLVEPEGGKVVVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVRFNLDPLSQHTDQEIWEVLGKCQLREVVQKKEEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNSTDTILQKTIRTEFADCTVITVAHRIPTVMDCTMVLSISDGKLVEYDEPMSLMMREESLFRKLVKEYWSHFQSAE* 1466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4022 1465 SUPERFAMILY ABC transporter transmembrane region 289 589 IPR036640 GO:0005524|GO:0016021
Psa3g4022 1465 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1221 1455 IPR003439 GO:0005524
Psa3g4022 1465 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 301 581 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa3g4022 1465 Gene3D ABC transporter type 1, transmembrane domain 271 597 IPR036640 GO:0005524|GO:0016021
Psa3g4022 1465 Gene3D ABC transporter type 1, transmembrane domain 868 1203 IPR036640 GO:0005524|GO:0016021
Psa3g4022 1465 CDD ABCC_MRP_domain1 616 815 - -
Psa3g4022 1465 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 915 1184 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa3g4022 1465 CDD ABC_6TM_ABCC_D2 903 1196 IPR044726 GO:0140359
Psa3g4022 1465 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 64 1465 - -
Psa3g4022 1465 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524
Psa3g4022 1465 Pfam ABC transporter transmembrane region 301 559 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa3g4022 1465 Pfam ABC transporter transmembrane region 905 1156 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Psa3g4022 1465 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 64 1465 - -
Psa3g4022 1465 Gene3D - 614 847 IPR027417 -
Psa3g4022 1465 SMART AAA_5 643 816 IPR003593 -
Psa3g4022 1465 SMART AAA_5 1247 1439 IPR003593 -
Psa3g4022 1465 Pfam ABC transporter 634 768 IPR003439 GO:0005524
Psa3g4022 1465 Pfam ABC transporter 1238 1386 IPR003439 GO:0005524
Psa3g4022 1465 CDD ABCC_MRP_domain2 1219 1439 - -
Psa3g4022 1465 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 618 839 IPR003439 GO:0005524
Psa3g4022 1465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 611 839 IPR027417 -
Psa3g4022 1465 CDD ABC_6TM_ABCC_D1 302 589 IPR044746 GO:0140359
Psa3g4022 1465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1210 1454 IPR027417 -
Psa3g4022 1465 SUPERFAMILY ABC transporter transmembrane region 898 1203 IPR036640 GO:0005524|GO:0016021
Psa3g4022 1465 Gene3D - 1204 1456 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4022 Psa-Chr3 373428681 373444498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4022 611 868 Calmodulin-binding Proteins AT2G36910 30.142 5.31e-26 114