Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4020 ATGATTATTGAAATCATTGTGATATCGGCGTCACGGATATGGTTACAGAAACGGATGTATATTAACTTTGTTTCCCCTAACAATCATGAATATCTGGAGGTTTTTGCCAAAGGTGTTGGCAAGGATTTGGTTGTACTTATGGCTGCAAGAGCATCAAGGATGGAGAACCAAGATGCAATTGATGCGCAATCGTTTCAATGTTGGCAGACCAAAGGAGGTACAGACTCTTCAAAATCTCAATCTTGCACAAAAAAGGCAGAAATCGAACGGAAGGTTCATGCGATGATTGACAAGTTTGCAGAACGTGGACTTCGTTCTCTTGGGATTGCAAGACAGGAAGTACGGAGGGAAGTAAGGAAGTGCAAGAGGACCATGGGAGTTTGTTGCTCTTCTCCCTTTTTTGACCCTCGAGACATGATAGCGCAGAGAACAATCAGAAGAGCTCTTGATCTTGGCGTTAGTGTCAAAATGATCACTGGTGATCAACTCGCAATGGTAAGGAACGGGAACGCGTCTAGGGATGGGGTAACATGTATCCTTCTCATCACTGCTCGGTGA 558 0.4409 MIIEIIVISASRIWLQKRMYINFVSPNNHEYLEVFAKGVGKDLVVLMAARASRMENQDAIDAQSFQCWQTKGGTDSSKSQSCTKKAEIERKVHAMIDKFAERGLRSLGIARQEVRREVRKCKRTMGVCCSSPFFDPRDMIAQRTIRRALDLGVSVKMITGDQLAMVRNGNASRDGVTCILLITAR* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4020 185 PANTHER PLASMA MEMBRANE ATPASE 82 168 - -
Psa3g4020 185 PANTHER PLASMA MEMBRANE ATPASE 29 62 - -
Psa3g4020 185 Gene3D - 135 166 IPR023214 -
Psa3g4020 185 PANTHER CALCIUM-TRANSPORTING ATPASE 82 168 - -
Psa3g4020 185 PANTHER CALCIUM-TRANSPORTING ATPASE 29 62 - -
Psa3g4020 185 Gene3D - 80 134 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4020 Psa-Chr3 373074822 373076263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4020 32 165 Primary Pumps ATPases AT2G24520 44.000 7.28e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4020 K01535 - vvi:100246249 118.627