Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4014 ATGGACAGGGTAGAAATGATGATTACATTCCACATGAGAGTTTTGTTCTTTTTCCTTTGGATGTTTCTCTCTTCATTTGGCAAAAGCCTGTTAACCTGTGAAACAACATCACCACATGATTCTAGCTACCATTGTAATGAAAATGAGTTACAAAATAATCATTGTGAAACATTTGCACTCTTTTTCACAAACCCTCACTTTTCCTCCCTCTCCAACCTCACCCTATACTTAGGACTCAACAGGTTTTCCATAGCAGAAACCAATGGTTTCTCTGCAGAAACTGAGTACCTTCCTCAAAATCATCCTCTTCTTATACCAATTAAGTGCAAATGCAAAAAAGGTGGTTATTTTCAAGCTGAATTAACAAAAACTACCATCAAAGGTGAGAGTTTTTATGACATTTCTCAATCACTTGAAGGCTTAAGTACTTGCAAGGCTATTAAAGACAACAACCTTGGTGTCTCTCCTTGGAACCTTGATGCTAAACACAAATTGATCATCCCTTTGAAATGTGCTTGCCCTTTTTCTTCTTTTGTCATACCAAAACCAAAACTTCTTCTTTCTTATCCTATAAGTGAGAATGATACTATTTCAAATTTGGCCTTAAAGTTCCATATTTCAAAAGAAGCTATTGTCATTGCCAATAACTTTTCATCATCATCATCAGTTCCTAAAACTAGAAGCTTAGAGCCTTTTACCTCTATTCTAATTCCATTGAATGGTAACCCTTTCCTTGATCCTTTAACTAAACCAAAACAACCCAATTCAGATTTTCCAAGAACCAACAATATTCCAGGAATTAGGCCTCACAAGAAGTCAAAAATGAAAAAGAGTGAACTATTTATTGGCCTAATTGGGGTTGCAATCGGAGTTTTCTTTGCTTTAGTAGTAACTTTTTTCTTCATTTGGTTCAAGAAGAAAAAGGTGGAAGAAAAGTCATGCAAAGAAAGAGATATGGAGCTACAACATCTGAATCAAAGTGTGAGAACCACAAGTGATAAGAAAGTTTCATTTGAGGGGTCACAGGACACTCTTGATAGTAAAATCATTGATGCAACGCCGCGTAAGATGTTGTTGGAGACATACACAATTGAAGATTTGAGAAAAGTAACAGAAGATTTCAGTTCAAATTTTCATATTGAAGGGTCAGTTTTTCATGGTTGTTTAAATGGTAAGAACATGGCAATCAAAAGAGTAAAAACCGAAATGCTGTCAAAATTAGAACATGGCCTTTTCCATGATTCACTTCATCATCATCCAAACATATTGAACCTTCTTGGCATAAGTATCTCAGAAGATTCATCAGAGTCAGAATCATTTTTGGTTTTTGAGTATGCTAAAAATGGTTCATTGAAAGATTGGCTTCATGGTGGCTTGGCCATCAAGAATCAGTTCATTGCTTCTTGCTATTGTTTCTTAAATTGGAAGCAAAGGCTTAGAATTTGTCTTGATGTGGCCAATGCTTTGGATTACATGCATAATGTTATGAATCCAAGTTATGTGCATAGAAATGTGAAGAGTAGGAACATCTTTTTAGATGAAGAGTTTGGTGCTAAGTTAGGAAATTTTGGGATGGCAAGTTTTGTAGTGAATGAAACTGAGGAGCCTCAATTTTATTCAAGTAATTATGCTTCTTGGAGTATTGGTTATTTAGCACCTGAATATGTTCATCAAGGCGTAGTTTCAACAAGCATTGATATCTTTGCATTTGGTGTGGTTTTGTTAGAAGTTTTATCTGGTCAAACACCTATAAATGGATCAAGTGATAGAGGTGAAGGAAGTGTTTGGCTTAGTGACAAAATAAAGAGTATTTTGAAGTCAGAGAATAATGATGTGAATGAATTACTAAGAGAGTGGATAGATAATGCATTAGGTGAGAATTACTCATTTGATGCAGCTTTGAAAGTTGCTAATATTGCAAAAGCTTGTGTGGAGGAAGATGCATGTTTGAGGCCTAATGCAAGAGAAATTGTTGAGAAGCTATCAACATTGTTGGAGGAATTACCAAATGAGGAAAATCAAATTTTGATGAGTGAAAATTCTTGCAAACCTCTTGTGGATGCTCTAGGAAGCAATATGTGA 2082 0.3535 MDRVEMMITFHMRVLFFFLWMFLSSFGKSLLTCETTSPHDSSYHCNENELQNNHCETFALFFTNPHFSSLSNLTLYLGLNRFSIAETNGFSAETEYLPQNHPLLIPIKCKCKKGGYFQAELTKTTIKGESFYDISQSLEGLSTCKAIKDNNLGVSPWNLDAKHKLIIPLKCACPFSSFVIPKPKLLLSYPISENDTISNLALKFHISKEAIVIANNFSSSSSVPKTRSLEPFTSILIPLNGNPFLDPLTKPKQPNSDFPRTNNIPGIRPHKKSKMKKSELFIGLIGVAIGVFFALVVTFFFIWFKKKKVEEKSCKERDMELQHLNQSVRTTSDKKVSFEGSQDTLDSKIIDATPRKMLLETYTIEDLRKVTEDFSSNFHIEGSVFHGCLNGKNMAIKRVKTEMLSKLEHGLFHDSLHHHPNILNLLGISISEDSSESESFLVFEYAKNGSLKDWLHGGLAIKNQFIASCYCFLNWKQRLRICLDVANALDYMHNVMNPSYVHRNVKSRNIFLDEEFGAKLGNFGMASFVVNETEEPQFYSSNYASWSIGYLAPEYVHQGVVSTSIDIFAFGVVLLEVLSGQTPINGSSDRGEGSVWLSDKIKSILKSENNDVNELLREWIDNALGENYSFDAALKVANIAKACVEEDACLRPNAREIVEKLSTLLEELPNEENQILMSENSCKPLVDALGSNM* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4014 693 SUPERFAMILY Protein kinase-like (PK-like) 364 661 IPR011009 -
Psa3g4014 693 ProSiteProfiles LysM domain profile. 187 237 IPR018392 -
Psa3g4014 693 Pfam Protein tyrosine and serine/threonine kinase 390 661 IPR001245 GO:0004672|GO:0006468
Psa3g4014 693 Gene3D Transferase(Phosphotransferase) domain 1 447 683 - -
Psa3g4014 693 ProSiteProfiles Protein kinase domain profile. 364 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g4014 693 Gene3D Phosphorylase Kinase; domain 1 380 446 - -
Psa3g4014 693 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 7 688 - -
Psa3g4014 693 Pfam LysM domain 191 228 IPR018392 -
Psa3g4014 693 Coils Coil 654 674 - -
Psa3g4014 693 PANTHER PROTEIN LYK2 7 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4014 Psa-Chr3 372641597 372644076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4014 43 686 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 39.881 1.85e-140 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Psa3g4014 PK_Tyr_Ser-Thr 3.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4014 - - gmx:100816082 975.311