Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4011 ATGAAATCTTCTACCTCCAAAATCACTGAAGCAATCAATCAGAACTCCAAGAGACAGTGCATGATTAAAGAATATGTCCTATTGGGTGTTGATGTCAATCAGACGAATCAAGGACCCCCAAAGTTCATACCGAGCATGGAGCTTGCTGCTGTTGTCATTGAGACATTATGTGAAAATTTGAACAATGAATGGATTCATAGTGATTATAGTTTGCATGAGAAGAAGTGCTTGGAAGACGGAATATGCTTGTGCAGGTCAGGAGAAAACGATATCTCGGTTAGCTCTACAGTTATACTTCCAGGTGGTGTACATGGTTCACCAAACAAAGAACCCAAGTTCAAACATCCAGCAGCATGGTTGAATTGTGCAGCAACATCCAGCAGCATGGTTGAATTGTGCAGCAGCCTCTGCAGCACCCAACAGAAGCCAACCCTGGTTCGTACAGTGATTCAAGTCGTGCGATCTGAGGGTTTAGTTGTCATTGGAAAATCACCGGATGAGAAGCAGATTATTGTAAAAGTATCACCTGATTCACCCCTACCATCTCCTCTTACAGCTTTTGTAGAAGTGATTGGTATCGGTAACAGTGACAAGTCCATCAAAGCTGAGTTATGGACCAACTTTGGGGATGAAATTGATATGTTCAGCTACCATAAGCTTTATGCAAATGGAGGATTCAAGTACTTGTATCAGTGGGAAAAATGGAGGCAACAAAACAAGGCCCTGTCATCAGATGGAAACACGATGCTTGCAGCAAGACCATTTCAACACAGATACTTTTTTCCCCTCATTCGAAAAGCATTGTGCAATCGCTTCCCTCCCACCTTCAGTACACGCTCATCTCCCATTGTTGTGAGAGCTTCATCACTCGAAGCTCTACACGACAGAGCTAAGCCGCCACCACCACTGGAAGCTTCGCAACTCGCAGATCGTTATCGCTCACACGCTTCCAGCTCGCTCCAACACTGTGAGAAGAGGAAGAGAGACGCTCAGAAGCTGTGCGTGTTCGTCATCATCGCCACCGCCACCGGAAGCTTCGCAGCTCGCAGATCGTTATCGCTCACACGCTTCCAATTCGCTCCAACATTGCGAGAAGAGGAAGAGAGGCGATCAGAAGTTGTGCTCGTGTTTTTCATCATCGTCGCCACCGCCGTCGTCGTCTTCGACAGGTAG 1173 0.4629 MKSSTSKITEAINQNSKRQCMIKEYVLLGVDVNQTNQGPPKFIPSMELAAVVIETLCENLNNEWIHSDYSLHEKKCLEDGICLCRSGENDISVSSTVILPGGVHGSPNKEPKFKHPAAWLNCAATSSSMVELCSSLCSTQQKPTLVRTVIQVVRSEGLVVIGKSPDEKQIIVKVSPDSPLPSPLTAFVEVIGIGNSDKSIKAELWTNFGDEIDMFSYHKLYANGGFKYLYQWEKWRQQNKALSSDGNTMLAARPFQHRYFFPLIRKALCNRFPPTFSTRSSPIVVRASSLEALHDRAKPPPPLEASQLADRYRSHASSSLQHCEKRKRDAQKLCVFVIIATATGSFAARRSLSLTRFQFAPTLREEEERRSEVVLVFFIIVATAVVVFDR* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4011 390 PANTHER EXPRESSED PROTEIN 1 109 - -
Psa3g4011 390 Gene3D - 134 229 IPR012340 -
Psa3g4011 390 PANTHER DUF3527 DOMAIN PROTEIN 1 109 - -
Psa3g4011 390 Pfam Replication factor A protein 3 140 220 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4011 Psa-Chr3 372292504 372294999 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g4011 146 230 Core DNA Replication Machinery Family AT4G18590 52.874 6.73e-23 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4011 K10740 - gmx:102665809 138.658