Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3986 ATGGAAAATGAATTAGTTTCGAGTGAAACTATTAAACCTTCGTCACCAACTCCTTCTCATCTTAGAATATATCCACTTTCTTTTATAGACAACATGTTTGTTTTTAACATTCCACTACTCTTCTTTTACAACCCAAACGAGAGTAGTGACCAAAATTCAAAAATATCACAACTCAAAAAATCATTATCTCATGTTCTATCCAAATACTATATTTTTGCTGGCAGATTGAAAGATAAAATCAATATTGAATGTAATGACCAAGGTGTGTCATTCCTGGTGACAAAGATAAAAAATAAATTATCAAATATTCTTAAACATTCGGAGGAAAAAATGTTGAACCCTTTGTTCGCCGATGGATTGCAATGGAAAGAAGGATATCCAAGTGAAGCTTTAGTAGCCATTCAAATCAATTGTTTTGAATGTGGAGGAATGGCTATAAGTATTTGCATGTATCACAAATGTGGTGATGCTTCCACACTTATCAATTTCATGAAGGAATGGGCTATTATCAGTCAAAAATTAGAAGAAGAAAATGGAGAAGAGTTATTAATATCACCCTTTCCTTTACTTGAAGGAGGAGCTTCAATTTTTCCACAAAAAAACTTACCTGTTTTCCCAGAATCTCTTCACAAAAGACAAAAGAATGTGGTGTGTAAAAGATTTGCATTTCAACCCTCAGTAATTAAGTTTCTCAAGGAATTGGCAAGTTCTAGTTCTGTACTTCATCCTTCGCGAGTCCTGGTTGTAAAAGCTTGGATTTACAAGCATGTAGTTTCATCAATGGGATTAAATTTCAAGACATCACCGTTTCTCATGGCCGTAGACCTTCGCAAAAGAATGATTCCTCCATTGTCTGAAAAATGTGTGGGAAATATAATTTGGATGTCATCTATGCTCGCTGATAAGGAGGAAATGGAGTTGAAAGATGTAGTATGCAAAATAAAAGAAGGGTTGTCTGAATTTTGTGACGTTTATCCAAAGTTATTTGGAGGGAATGATTGTTCGTTATTATATGAGTTTATAAATAAAGCTATTAATCTTAAATCTAAGAAAAAAGATGGGGTTGGTTTTAGTAGTTGGTGTAATTTTCCAATTTATGATGTAGATTTTGGATGGGGAAAACCAACATGGGTTACTACTTGTGGTTGTTCTTGGAAGAATCTCATATTTCTAATGGATAGAAAAGATGGGAAAGGGATTGATGCGATTGTTAACTTGGAAGAGAATCATATGACTAAATTTGAGCATGAATATGTGGAACTTCTTCGATGTGCCTCTCCAAAGGTTGTGACAAACTCATGGATTGCTACTTCTGATTGTTCTTGA 1326 0.3409 MENELVSSETIKPSSPTPSHLRIYPLSFIDNMFVFNIPLLFFYNPNESSDQNSKISQLKKSLSHVLSKYYIFAGRLKDKINIECNDQGVSFLVTKIKNKLSNILKHSEEKMLNPLFADGLQWKEGYPSEALVAIQINCFECGGMAISICMYHKCGDASTLINFMKEWAIISQKLEEENGEELLISPFPLLEGGASIFPQKNLPVFPESLHKRQKNVVCKRFAFQPSVIKFLKELASSSSVLHPSRVLVVKAWIYKHVVSSMGLNFKTSPFLMAVDLRKRMIPPLSEKCVGNIIWMSSMLADKEEMELKDVVCKIKEGLSEFCDVYPKLFGGNDCSLLYEFINKAINLKSKKKDGVGFSSWCNFPIYDVDFGWGKPTWVTTCGCSWKNLIFLMDRKDGKGIDAIVNLEENHMTKFEHEYVELLRCASPKVVTNSWIATSDCS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3986 441 Gene3D - 213 425 IPR023213 -
Psa3g3986 441 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 427 - -
Psa3g3986 441 Pfam Transferase family 4 418 - -
Psa3g3986 441 Gene3D - 1 203 IPR023213 -
Psa3g3986 441 PANTHER F21J9.9 5 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3986 Psa-Chr3 369117202 369118643 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3986 35 421 Monolignol Biosynthesis Gene Families AT5G48930 24.331 3.53e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3986 - - gmx:100806928 427.557