Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3970 ATGACCGTTTTCTTTATCACACTCATCTCTCTGTTTTTCCTTATCATCACATTGAAGATCTTCTTCCACACAACAACAAGCTACAACAACACCACAATAGCAGTAGCACCTTATGGTGACCATTGGCGCAATCTTCGTCGTATAGTAACAACCGAGCTACTCTCATCTCACCGTTTAAATTCCTTCTTGGAAATACGAAGAGATGAGATTATGAGACTAATACAAAAGTTAGCACAAGTGTCATACAATGATTTTTCAGAAGTTGAACTTACGTCAATATTTTCAGAAATGACATTCAACATCATCATGAGAATGATGTCAGGGAAACAATATTATGGTGATGATTATGATGTGAGTTATATTGAGGAAGCAAGGTTGTTCAGAGAGATAGTTAAGGAAATTTCACAACCTAAATATTACACATACCAAATCATCAAAGGACTTATTATGGTTATGCTACTTGCAGGAACCGACACATCATCTGTAACCTTAGAATGGGCTATATCCAATTTATTAAATAATCCAAATATATTAAAGAAGGCAAAAGATGAGATCGACACTCACATGGGACAGGCCCACTTAGTAGATGAACACAATATCTCAAAACTTTCTTATCTTCAAAGCATTGTTTATGAGACATTTCGATTACATCCAGCTGCTCCATTATTAATGCCTCATTTTTCTTCAGAAGATTTTACAATTGAAAAATATAATATCCCACAAAACACAATTTTAATGGTCAATTCATGGGTCATTCATAGAGATCCAAATTTGTGGGTTGAACCTCTATGTTTTAAGCCTGAGAGATTTGAGAAAGAAGGTGAGACAAATAAACTACTTTCATTTGGAAGGGGAAGAAGGGTTTGTCCGGGGACAAACTTAGCCCAATGCACTGTGAGTTTGAGTTTAGGCTTATTGATTCAGTGTTTTGAGTGGAAACGTATTGGTAAAGAAAAAATAGACATGACCGAAGGAAAAGGAATCACTGTGGCAAAAAAGTTTTCCTTAAAAGTAATGTGCAAATTGCGTCATCCACTAAAGATTAACGATGCTTTCTAA 1059 0.3541 MTVFFITLISLFFLIITLKIFFHTTTSYNNTTIAVAPYGDHWRNLRRIVTTELLSSHRLNSFLEIRRDEIMRLIQKLAQVSYNDFSEVELTSIFSEMTFNIIMRMMSGKQYYGDDYDVSYIEEARLFREIVKEISQPKYYTYQIIKGLIMVMLLAGTDTSSVTLEWAISNLLNNPNILKKAKDEIDTHMGQAHLVDEHNISKLSYLQSIVYETFRLHPAAPLLMPHFSSEDFTIEKYNIPQNTILMVNSWVIHRDPNLWVEPLCFKPERFEKEGETNKLLSFGRGRRVCPGTNLAQCTVSLSLGLLIQCFEWKRIGKEKIDMTEGKGITVAKKFSLKVMCKLRHPLKINDAF* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3970 352 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 22 135 - -
Psa3g3970 352 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 135 347 - -
Psa3g3970 352 Gene3D Cytochrome P450 139 345 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g3970 352 PRINTS P450 superfamily signature 155 172 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g3970 352 PRINTS P450 superfamily signature 208 219 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g3970 352 PRINTS P450 superfamily signature 280 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g3970 352 PRINTS P450 superfamily signature 289 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g3970 352 PRINTS E-class P450 group I signature 97 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g3970 352 PRINTS E-class P450 group I signature 248 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g3970 352 PRINTS E-class P450 group I signature 279 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g3970 352 PRINTS E-class P450 group I signature 289 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g3970 352 SUPERFAMILY Cytochrome P450 26 343 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g3970 352 Gene3D Cytochrome P450 17 138 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g3970 352 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 282 291 IPR017972 GO:0005506|GO:0016705
Psa3g3970 352 Pfam Cytochrome P450 138 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g3970 352 Pfam Cytochrome P450 22 120 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g3970 352 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 22 135 - -
Psa3g3970 352 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 135 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3970 Psa-Chr3 367363363 367365149 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3970 26 343 Cytochrome P450 AT4G37370 45.383 3.64e-117 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3970 K13260 - gmx:100811727 377.867