Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3955 ATGGAGAATTCCAACTATGAAAACGGTTTCCAACAAGTTAATGTAAAGCTAACAAGTGAACCAACACTTGTTCCACCATCTGAAGAAACAAAGAAAGAAATGTACTTTCTATCAAACCTTGATCAAAACATTGCTGTCATTGTTCGAACCGTTTATTGTTTCAAAAACAAAGACAAGGGAAACGAGAATGCTTGTGAAGTGATTAAGAATGCATTGAAAGATGTTCTTGTTCAATACTACCCTCTTGCTGGGAGATTGAGTATAAGCTCAGAGGGTAAACTGATTGTGGATTGTAATGGAGAAGGTGCTCTTTTTGTTGAAGCTGAAGCTAATTGTTCAATGGAAGAGATTGGTGATATAACAAAACCTGATCCTAGGACTCTTGGGATGTTGGTTTATGATATTCCTGATGCTAAACATATTCTTCAGATGCCTCCTTTGGTTGCTCAGGTGACAAAATTCAAATGTGGAGGTTTTGCTCTTGGACTATGCATGAATCATTGCATGTTTGATGGAATTGGAGCTATGGAGTTTGTGAATTCATGGGGAGAACTAGCAAGAGGTTTACCAATCTCGATCCCTCCGGTTCTAGACCGAAGCATACTAAAGGCGCGCAGTCCGCCAAAGATTGAGCATTTGCACCAAGAATTCGCTGACATTGAAGACAAATCAAACACTAGTAGTTTATACGAAGACGAAATGGTGTATAGGTCATTCTGTTTCAATCCCGAAAAACTAAAAGTATTGAAGAAAAAAGCTATGGAAGATGAAAGTAATGTCCTTGAATCTTGCACAACATTTGAAGTGCTTTCAGCTTTTGTTTGGATAGCTAGAACAAAAGCACTTAAAATGCTTCCAGAACAAGAAACAAAGCTTCTTTTTGCTGTGGATGGAAGGGCAAAATTTGAACCAAAACTTCCAAAAGGGTATTTTGGGAATGGAATTGTGCTAACAAAATCTGTTTGTAAAGCAGGTGAAATTACAAACAAGCCCTTTTCATATACTGTGAAACTTATTCAAGAAGCAATTAAAATGGTGAATGATGGATACATGAGATCAGCTATTGATTATTTTGAGGTAACAAGAGCTAGGCCTTCTTTGGCTTGCACACTCTTGATCACAACTTGGTCTAGGCTTTCTTTTCACATCACTGATTTCGGTTGGGGCGAACCGGTTCTGTCGGGACCAGTTGGCTTGCCGGAGAAGGAAGTGATTTTGTTCCTTTCACATGGTCAGGAGAGGAGGGACATCAATGTGCTTCTTGGTTTGCCTGCTCCTGTCATGAAGATCTTTCAAGATTTGATGAAGATTTAG 1314 0.3896 MENSNYENGFQQVNVKLTSEPTLVPPSEETKKEMYFLSNLDQNIAVIVRTVYCFKNKDKGNENACEVIKNALKDVLVQYYPLAGRLSISSEGKLIVDCNGEGALFVEAEANCSMEEIGDITKPDPRTLGMLVYDIPDAKHILQMPPLVAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGELARGLPISIPPVLDRSILKARSPPKIEHLHQEFADIEDKSNTSSLYEDEMVYRSFCFNPEKLKVLKKKAMEDESNVLESCTTFEVLSAFVWIARTKALKMLPEQETKLLFAVDGRAKFEPKLPKGYFGNGIVLTKSVCKAGEITNKPFSYTVKLIQEAIKMVNDGYMRSAIDYFEVTRARPSLACTLLITTWSRLSFHITDFGWGEPVLSGPVGLPEKEVILFLSHGQERRDINVLLGLPAPVMKIFQDLMKI* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3955 437 Pfam Transferase family 20 434 - -
Psa3g3955 437 Gene3D - 10 216 IPR023213 -
Psa3g3955 437 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 15 436 - -
Psa3g3955 437 Gene3D - 217 436 IPR023213 -
Psa3g3955 437 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3955 Psa-Chr3 365905124 365907605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3955 12 435 Monolignol Biosynthesis Gene Families AT5G48930 33.945 1.30e-83 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3955 K15400 - gmx:100804504 750.355