Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3934 ATGAGGTTATCACTTTCAGAGATAACATCAGCTACAATGGGGTTTAACAGGGATAGACTAGTTGGTGAAGGTGCATCTGCAAAAGTTTATAAAGGGTCACTTCCATTTGGAGGTGATGTAGCTGTCAAGAGAGTCGAAAAAGTCGATAATTTTGACCATTTACACAATCCTTTCGCAATGGAATTCGCTACAATGGTTGGTTGCTTGTGGCACAAGAATCTGTTTCAGCTCAAAGGATGGTGTTGTGAAAAGAATGAATTGGTTTTGGTTTATGAGTATCTACCTAATGGAAGCCTTGATAAAGTTCGGCATAAGCAATTTAAGATCTTCATTTGTGCTTTCATGGAAACAAAGAGTTAA 360 0.3806 MRLSLSEITSATMGFNRDRLVGEGASAKVYKGSLPFGGDVAVKRVEKVDNFDHLHNPFAMEFATMVGCLWHKNLFQLKGWCCEKNELVLVYEYLPNGSLDKVRHKQFKIFICAFMETKS* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3934 119 ProSitePatterns Protein kinases ATP-binding region signature. 21 43 IPR017441 GO:0005524
Psa3g3934 119 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 4 102 - -
Psa3g3934 119 ProSiteProfiles Protein kinase domain profile. 15 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3934 119 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Psa3g3934 119 PANTHER - 4 102 - -
Psa3g3934 119 Pfam Protein kinase domain 16 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3934 119 SUPERFAMILY Protein kinase-like (PK-like) 5 107 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3934 Psa-Chr3 364324814 364325173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3934 2 106 Receptor kinase-like Gene Family AT5G42120 57.143 6.50e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa3g3934 Pkinase 1.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3934 - - gmx:100783805 175.252