Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3927 ATGCTGCTCTATCCTCATGAAACTCCCGACTCAAGTTCTTCAGATGATTTCCAGCTTTCTGAATTCAGAACATCATCACATGAAAATTATCCAGAATCCAACTTAAGTAGTTTATCATACATTTCCGTTCCTGAGGAGGATTACCTTGGCAATGTAGGTCCTGAAATACGACTTTCAAGTGGACATCGTTCAGTGGTTGAGGATACATCTTTTTCTGGATCAATGCAACACAACATTGGTGATGATCTCAGGATGAGTCTTTCTTCTGCGGTTGCAAGAAAAATGCCTGGTATACAATCTGAAGTTGCTTGCTTTGAAAAGGACACAAGTTTCAGTTTCGAGGAAGGCCCTGCGGTTTCACAATTTTGTTCTAAGTATGTTTCTTCAAAGTCAGAATCTTCTATTCGTTGGGAAAATCCAAGCAAAGGAAAGATGAATAGCCAACTACGATCAACAGGCTGTCATCGGCATGACAGTGCTGAAACTGTTCGGAGAGCTCTTCATCTTGGTGCCAATGTTAAAATGATTACCGGTGATCAACTTGCCATAGGAAAGGAGACTGGGAGGAGACTTGGGATGAGAGCTAATATGTACCCACCTGTTACCGTGCTTGGACAAGACAGAGATGCGAGTATTGCTGCACTTCCAGTTGAGGAGCTGATTGAGAAGGCATATGAATTTGCTGGGGTATTTTTAGAGCATAAATATGAAATTATAAAGAGGTTGCAAGAAAGGAAACACCTTTATGGAATAACGGGGGATGGTGTCAACAATGCTCCATCTTTGAAGAAGACCGATATTGGAATTGTTGTTGCCGAGGCCACAGATGCCGTAAGAGGTGCTTCTGATATTGTCCTTGAAGAACCCGGATTGAGTGTTATCATCAGTGTCGTCTTAACTAGTAGAGCTATTTTCCAAAGAATGAAAAAACTACACGATCTACGCGGTATCTATCATTATCCGTATAGTGTTTGGCTTCATGTTCATTGCACTGATATGGAAATTTGA 1008 0.4127 MLLYPHETPDSSSSDDFQLSEFRTSSHENYPESNLSSLSYISVPEEDYLGNVGPEIRLSSGHRSVVEDTSFSGSMQHNIGDDLRMSLSSAVARKMPGIQSEVACFEKDTSFSFEEGPAVSQFCSKYVSSKSESSIRWENPSKGKMNSQLRSTGCHRHDSAETVRRALHLGANVKMITGDQLAIGKETGRRLGMRANMYPPVTVLGQDRDASIAALPVEELIEKAYEFAGVFLEHKYEIIKRLQERKHLYGITGDGVNNAPSLKKTDIGIVVAEATDAVRGASDIVLEEPGLSVIISVVLTSRAIFQRMKKLHDLRGIYHYPYSVWLHVHCTDMEI* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3927 335 MobiDBLite consensus disorder prediction 137 157 - -
Psa3g3927 335 PRINTS H+-transporting ATPase (proton pump) signature 224 240 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa3g3927 335 PRINTS H+-transporting ATPase (proton pump) signature 252 268 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa3g3927 335 PRINTS H+-transporting ATPase (proton pump) signature 283 308 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa3g3927 335 Gene3D - 290 311 - -
Psa3g3927 335 SUPERFAMILY HAD-like 154 298 IPR036412 -
Psa3g3927 335 PRINTS P-type cation-transporting ATPase superfamily signature 169 179 - -
Psa3g3927 335 PRINTS P-type cation-transporting ATPase superfamily signature 252 271 - -
Psa3g3927 335 PRINTS P-type cation-transporting ATPase superfamily signature 275 287 - -
Psa3g3927 335 PANTHER CALCIUM-TRANSPORTING ATPASE 155 310 - -
Psa3g3927 335 PANTHER ATPASE 9, PLASMA MEMBRANE-TYPE 155 310 - -
Psa3g3927 335 Gene3D - 155 289 IPR023214 -
Psa3g3927 335 MobiDBLite consensus disorder prediction 137 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3927 Psa-Chr3 363793437 363795445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3927 156 309 Primary Pumps ATPases AT2G18960 79.870 1.58e-78 255