Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3913 ATGGCAGATTCAATCACCACCATTAAAGCTTGGACTTACTCCGAATACGGCAACGCCTTTGATGTTCTAAAATTTGACCCAAAGGTGGCTTTACCTGATGTGAAAGATGACCAAGTTCTCATCAAAGTTGCTGCTGCTTCTCTTAATCCCATTGATTATAAGAGATTGAATGGCGCCTTCAAAGCCTTCAACGCCTCTGACTCTCCTTTTCCGACTGCTCCAGGGTATGATGTATCTGGAGTTGTGGTTAAAGTAGGGACTGAAGTGAAAAAGTTTAAGGTTGGAGATGAAGTTTATGGTGATATCAATGAGAATGCTTTGGAATATCCAAAGGTGATTGGTTCACTAGCAGAGTATACTACTGCAGAAGAGACAGTGTTGGCTCACAAGCCGAAAAATTTGAGCTTTGCTGAAGCTGCTAGTCTTCCTTTAGCAATTGAGACTGCTTATGATGGCCTTGAACGAGCTGGCTTCTCTGCTGGTAAATCTATACTTGTTCTTGGCGGTGCCGGTGGAGTTGGAACTCATGTCATTCAGCTTGCCAAGCATGTTTTTGGCGCCTCCAAAGTAGCAGCTACATCTAGCACCAAGAAACTAGAATTGTTAAGCAAGTTAGGAGCTGATTTGCCTATTGATTATACAAAGGAGAATTTTGAAGATCTGCCTGAGAAGTTCGATGTGGTGTATGATACAGTAGGGGAAACTGAGAAGGCATTCAAGGTTGTGAAAGAAGGTGGCAAAGTTGTGACGATTGTACCACCAGGTTTTCCACCAGCAATATTTTTTATACTTACTTCAAATGGGGCTATCTTAGAGAAACTAAAGCCTTACTTGGAGAGTGGAAGGGTGAAGGCAGTGCTTGATCCCAAGAGTCCATTTCCATTTTCTCAAGCTGTTGAAGCATTTTCCTATCTCGAAACTGGCAGAGTTACTGGAAAAGTAGTTATCCATCCCATACCATGA 963 0.4247 MADSITTIKAWTYSEYGNAFDVLKFDPKVALPDVKDDQVLIKVAAASLNPIDYKRLNGAFKAFNASDSPFPTAPGYDVSGVVVKVGTEVKKFKVGDEVYGDINENALEYPKVIGSLAEYTTAEETVLAHKPKNLSFAEAASLPLAIETAYDGLERAGFSAGKSILVLGGAGGVGTHVIQLAKHVFGASKVAATSSTKKLELLSKLGADLPIDYTKENFEDLPEKFDVVYDTVGETEKAFKVVKEGGKVVTIVPPGFPPAIFFILTSNGAILEKLKPYLESGRVKAVLDPKSPFPFSQAVEAFSYLETGRVTGKVVIHPIP* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3913 320 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 161 182 IPR002364 GO:0008270|GO:0016491
Psa3g3913 320 CDD MDR_like_2 9 316 - -
Psa3g3913 320 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 5 320 IPR044626 GO:0016628
Psa3g3913 320 SMART PKS_ER_names_mod 18 316 IPR020843 GO:0016491
Psa3g3913 320 Pfam Zinc-binding dehydrogenase 205 316 - -
Psa3g3913 320 SUPERFAMILY GroES-like 5 168 IPR011032 -
Psa3g3913 320 Pfam Alcohol dehydrogenase GroES-like domain 37 103 IPR013154 -
Psa3g3913 320 Gene3D - 153 267 - -
Psa3g3913 320 Gene3D - 15 316 - -
Psa3g3913 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 260 IPR036291 -
Psa3g3913 320 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 5 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3913 Psa-Chr3 361585565 361587451 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3913 68 257 Monolignol Biosynthesis Gene Families AT4G37980 26.457 9.58e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3913 K18980 - gmx:100817947 489.574