Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3907 ATGGGAGTTCACGGTCTCTGGGAACTTCTCTCCCCCGTGGGTCGCCGTGTCTCCGTCGAGACCCTCGCCGGCAAAACCCTAGCCATCGACGCGAGCATATGGATGGTACAGTTTATCAAAGCGATGCGTGACGAGAAAGGTGAAATGGTTCGCAACGCTCATTTGCTTGGATTCTTCCGTCGCATTTGCAAACTCTTATTCCTAAGGACTAAGCCTGTTTTTGTCTTTGACGGTGGAACGCCTGCCCTGAAGCGCCGCACCGTCATTGCTCGACGGAGACAGCGTGATGTTTCCCAAGCTAAAGTCCGCAAGACTGCCGAGAAATTGCTTCTTAATCAC 339 0.528 MGVHGLWELLSPVGRRVSVETLAGKTLAIDASIWMVQFIKAMRDEKGEMVRNAHLLGFFRRICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQRDVSQAKVRKTAEKLLLNH 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3907 113 SMART xpgn3 1 98 IPR006085 GO:0004518
Psa3g3907 113 PRINTS Xeroderma pigmentosum group G protein signature 2 19 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Psa3g3907 113 PRINTS Xeroderma pigmentosum group G protein signature 54 77 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Psa3g3907 113 PRINTS Xeroderma pigmentosum group G protein signature 96 113 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Psa3g3907 113 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Psa3g3907 113 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 72 91 IPR006084 -
Psa3g3907 113 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 1 113 - -
Psa3g3907 113 SUPERFAMILY PIN domain-like 2 102 IPR029060 -
Psa3g3907 113 CDD PIN_XPG_RAD2 2 111 - -
Psa3g3907 113 Gene3D - 1 112 - -
Psa3g3907 113 Pfam XPG N-terminal domain 1 95 IPR006085 GO:0004518
Psa3g3907 113 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS 1 113 - -
Psa3g3907 113 ProSitePatterns XPG protein signature 1. 70 84 IPR019974 GO:0016788
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3907 1 107 Core DNA Replication Machinery Family AT5G26680 33.333 1.29e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3907 K10846 - gmx:100820295 218.009