Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3886 ATGGGTGAATTTAAAGAGAAACTAGTAACCCTATACAAGAGTAGATGGTTCGTTTTTGTTGGAGCAATGTGGTTACAGTCGTGGGCGGGTATTGGGTACTTGTTTGGAAGTATTTCGCCGGTGATTAAGAGCTCGCTTGGTTATAATCAAAAGCAGCTTGCTATGTTGGGGGTTGCCAAAGACCTTGGTGATTGTGTGGGATTTGTAACGGGGATTTTGTGTGAGGTTTTGCCTATTTGGGGGGCTTTGCTTGTGGGGGCTTGTTTGAATCTCCTTGGGTATGGATGGGTTTGGTTGATTGTTACTGGCCAAGCTCCTACTCTTCCTTTATGGGCTATCTGTATTCTTATATTTATTGGAACAAACGGTGAAACCTACTTCAACACAGTTTCATTGGTATCCTGTGTGCAAAATTTCCCGAAAAGCCGAGGTCCTGTCGTCGGTATTCTAAAAGGCTTTGCTGGTTTGAGTGGTGCGATATTGACACAGATATATGTACTTATACATTCCCCTGATCACGCATCATTAATATTTATGGTTGCTGTTGGTCCATCCTTGGTAGCAATTGGTCTTATGTTCATTGTTAGACCGGTCGGAGGTCACAAACAAGTGCGTCCATCGGACGGAAAATCGTTCACACTTGTCTATGGTGTATGCCTCTTGTTGGCTGCTTATATGATGGGAGTTATGATTGTTCAAGATTTAGTTGATCTGAGTGAAACTGTTATCACAATTTTTACTGGTATCCTCTTTCTGATTCTCCTCACCCCAATTGTGATTCCTCTGTCGTTAACTTTCGGACCAGTTGAAAAACCTCTAGAGGAAGAAGCACTTCTAGAACCACAAGGACATTCACAACTTGATTCTGATGAAGTAATATTAAGTGAGTTGGAAGATGAGAAGCCTAAGGATATGGACTTGCTCCCTGCATTGGAAAGACAGAAACGTATAGCGCATTTACAATCGAGATTACTACAAGCAGCTGCAGTAGGAGCTGTTAGGGTTAAGCGGAGAAGAGGACCACATAGAGGAGAAGATTTTACGTTGATGCAAGCTTTGATTAAAGCTGATTTTTGGCTTCTTTTTCTTTCCATGGTCTTAGGTTCTGGATCTGGTTTGACCGTAATTGATAATCTCGGTCAGATGAGTCAATCTCTAGGTTATGACAATGCACATATATTTGTCTCCATGATCAGTATTTGGAACTTTCTTGGACGTGTTGGAGGTGGCTACATATCCGAGATTGTTGTCAAGGATCATACATATCCAAGACCAGCTGCATTGGCTGCATTTCAACTAGTTATGACTATTGGTCATCTTTTCATCGGCATGGGATGGCCGGGTTCAATGTACGTTGGCACTTTACTAGTTGGACTTGGTTATGGCGCACATTGGGCAATTGTTCCAGCTACAGCCTCTGAATTATTCGGTTTGAGAAACTTTGGTGCATTATACAATTTCCTCACACTGGCAAACCCAGTTGGAACTCTCGTCTTCTCTAGTCTCATTGCTAGCAGAATCTATGACCGTGAAGCAGAAAAACAAGCTCATGGTGGCGGACACTTGAATTTAGGATCGATTGTCTCTCAGGCTCTTAATAGTGGCGAGCAGCTAAAGTGTGAAGGTTACATATGCTTCTTCCTGACTTCATCTATCATGGCAGGATTATGCATTGTTGCGACTGCCTTAAGCATGTTTCTCGTGTTCCGAACAAGGATTGTTTATGCAAACTTGTATGGAAAATCTTCTATGAGAAACCTTCTATAA 1767 0.4216 MGEFKEKLVTLYKSRWFVFVGAMWLQSWAGIGYLFGSISPVIKSSLGYNQKQLAMLGVAKDLGDCVGFVTGILCEVLPIWGALLVGACLNLLGYGWVWLIVTGQAPTLPLWAICILIFIGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYVLIHSPDHASLIFMVAVGPSLVAIGLMFIVRPVGGHKQVRPSDGKSFTLVYGVCLLLAAYMMGVMIVQDLVDLSETVITIFTGILFLILLTPIVIPLSLTFGPVEKPLEEEALLEPQGHSQLDSDEVILSELEDEKPKDMDLLPALERQKRIAHLQSRLLQAAAVGAVRVKRRRGPHRGEDFTLMQALIKADFWLLFLSMVLGSGSGLTVIDNLGQMSQSLGYDNAHIFVSMISIWNFLGRVGGGYISEIVVKDHTYPRPAALAAFQLVMTIGHLFIGMGWPGSMYVGTLLVGLGYGAHWAIVPATASELFGLRNFGALYNFLTLANPVGTLVFSSLIASRIYDREAEKQAHGGGHLNLGSIVSQALNSGEQLKCEGYICFFLTSSIMAGLCIVATALSMFLVFRTRIVYANLYGKSSMRNLL* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3886 588 CDD MFS_Mch1p_like 14 561 - -
Psa3g3886 588 Gene3D MFS general substrate transporter like domains 324 532 IPR036259 -
Psa3g3886 588 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 4 583 - -
Psa3g3886 588 Pfam Nodulin-like 15 262 IPR010658 -
Psa3g3886 588 SUPERFAMILY MFS general substrate transporter 212 572 IPR036259 -
Psa3g3886 588 SUPERFAMILY MFS general substrate transporter 6 201 IPR036259 -
Psa3g3886 588 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3886 Psa-Chr3 356382606 356386957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3886 5 582 Nodulin-like Gene Family AT5G14120 68.611 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3886 - - aprc:113861924 972.23