Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3822 ATGCCGGATCCCAATCTTAACGATGACACCGACGGAGAACAACCACCGCCTCCTCCGTCGGAGCATGAGGAAAATCAACAGAAGGAAGAGAAGAAAGAAGAAACAGTAGAAAACACAGAATCTGTAGATGCCGATGATGCTGATGTCGTGGAGTCTTCTCCTCCTAGCCTGGAGAAAGTTTCAGAAGAAATCGATCAATTTCTGGTTGGATTGTATGAGAAAGAAGCGGCTTCGGTTTCGTTTGACATTCCTGATTATGTAGGAAAGTTCTTGGATCTGTTGGAGGAGAATCTAGGGAAATGTGACACTGGCGAAGGTAAAGCGAAGTGGGAAGAGATTCTGGAAAAAGATACATGGTTATTGGAAGCTGTGAATCGGATTTCGAAGCTTAAGAAAATTCTGACTCGTCACGATGAAAACGAAACGGTAGAAGATAAGAATGAGAAAAGAGACTCAACAAGGAATCGAATTGGTGTAATTCAACAGAAAGCCATGTCTTTTTTGGAAGAAGACTTTCGAGTGTTGATGGAGGATTCTAGAATGCCAATGGAATTGAGTTCAGATGGACAGAACATTGATTCAAAAGGAAAACAGGGGGCATCAGAGGAAGTTGAATCTGATCATCAACTGGAGGAATCCGAGACGAATTTCCCGGGTTATACAGACGAGGCGATTGCTTGTATGAGCAAGATTGCCTGCGAGATGTTAACCGGGGGATACGAATCGGAGTGTTGTCAGGTGTACATTGTGGCGAGAAGGACTGCGTTTGAGGAGATTCAACAGAAATTGGGGCTGGAAAGAATCAGCATTGATGATATGGTTCAGAAGGTGCAATGGGAGATTCTAGCAAGAGATATGATTCCGGCGTGGACAAACACGATTCGTAAATGCACGACCGTGTATTTCCCCGGGGAGAGGAAACTAGCGGAGGCGGTATTCTCAAGTAACCAGTCGGTTGCAGCTGGTCTATTTGGTAGCCTCTCCCGCGGAGTTGTGATTCCACTTCTCAATTTCGCGGAAGGGGCTGCCATGACTAAGCGTGCAGGAGAGAAGCTATTCAAATTGCTTGACATGTACGAAACACTTAGAGATGTTATACCAAAGTTGGACGGGCTCTTTCCTGAAGAGTCCTCCGAAGAGTTGAAGACAGAGATAACCCTCGCCAAAACACGTCTTGGCGAGGCAGCTATCGCTATCTTCTGCGACTTAGAAAACTCAATCAAATCAGAAACCGTGAAAAATCCAGTCCCTGGTGGCGCGGTTCACCCTCTCACACGCTATATAATGAATTACCTCATCATAGCTGGTGATTACAAAGAAACCCTAGAACAGGTTTTCCGGGATCATTCAAAGATCGAATGTGTAGATTCAAGTAGTAGACTTGATGACAATGAAAACCACGTAGTTATAGAAGAAGCATCGTCGCCATTTTCAGCACAGGTAATGAGAGTCATGGATTTACTAGATGCAAGCCTAGACGGGAAAGCCAAACTGTACCGCGACATAGCATTAAGCAACTTCTTCATGATGAACAATGGTAGATACATTTTACAAAAGATCAAAAGTTCATCTGAAATGAGCCAAGTGGTGGGTAACACATGGTGTAGAAAGAAATCCTCTGATTTAAGAAACTATCACAAGACATACCAGAGAGAAACATGGAACAAATTGTTGAATTGTCTGAGTCAAGAAGGGTTGAATGTGAATGGGAAGGTGCAAAAGGCAGTACTGAAAGAGAGGTTTAAAAGCTTCAGTACATTGTTTGATGAGATTCATAGGACACAAAGCTTATGGGTTGTGAAGGATGAGCAGCTTCAATCGGAGCTTCGGGTTTCGATATCCGCGGTGGTGATTCCGGCATACAGGGCATTCTTTGGGAGGTTTTCACAGAATTTAGATTCTGGGAGACAGGCAGAGAAGTATATAAAGTACCAACCTGAGGATATAGAGACTTACATTGATGATTTGTTTGATGGAAAACCTCCTCAATCTAATGCTAGAAGGAAAACATAA 2013 0.4352 MPDPNLNDDTDGEQPPPPPSEHEENQQKEEKKEETVENTESVDADDADVVESSPPSLEKVSEEIDQFLVGLYEKEAASVSFDIPDYVGKFLDLLEENLGKCDTGEGKAKWEEILEKDTWLLEAVNRISKLKKILTRHDENETVEDKNEKRDSTRNRIGVIQQKAMSFLEEDFRVLMEDSRMPMELSSDGQNIDSKGKQGASEEVESDHQLEESETNFPGYTDEAIACMSKIACEMLTGGYESECCQVYIVARRTAFEEIQQKLGLERISIDDMVQKVQWEILARDMIPAWTNTIRKCTTVYFPGERKLAEAVFSSNQSVAAGLFGSLSRGVVIPLLNFAEGAAMTKRAGEKLFKLLDMYETLRDVIPKLDGLFPEESSEELKTEITLAKTRLGEAAIAIFCDLENSIKSETVKNPVPGGAVHPLTRYIMNYLIIAGDYKETLEQVFRDHSKIECVDSSSRLDDNENHVVIEEASSPFSAQVMRVMDLLDASLDGKAKLYRDIALSNFFMMNNGRYILQKIKSSSEMSQVVGNTWCRKKSSDLRNYHKTYQRETWNKLLNCLSQEGLNVNGKVQKAVLKERFKSFSTLFDEIHRTQSLWVVKDEQLQSELRVSISAVVIPAYRAFFGRFSQNLDSGRQAEKYIKYQPEDIETYIDDLFDGKPPQSNARRKT* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3822 670 MobiDBLite consensus disorder prediction 15 38 - -
Psa3g3822 670 Gene3D Exocyst complex component Exo70 109 667 - -
Psa3g3822 670 PANTHER EXOCYST COMPLEX PROTEIN EXO70 46 667 IPR004140 GO:0000145|GO:0006887
Psa3g3822 670 MobiDBLite consensus disorder prediction 198 212 - -
Psa3g3822 670 Pfam Exo70 exocyst complex subunit 290 655 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa3g3822 670 SUPERFAMILY Cullin repeat-like 122 658 IPR016159 -
Psa3g3822 670 MobiDBLite consensus disorder prediction 184 215 - -
Psa3g3822 670 MobiDBLite consensus disorder prediction 1 60 - -
Psa3g3822 670 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 46 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3822 Psa-Chr3 344593724 344596436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3822 56 670 EXO70 exocyst subunit family AT5G13990 50.078 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3822 K07195 - gmx:100820172 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3822 3 344593724 344596436 Psa1g2224 1 169463249 169468420 PCT