Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3792 ATGAGCATTATCACTAGTAGTTCAAAACTCGGACCGCTTGTTTGTCTGGAGGATCTTTACCGGCTTACCACTTCCATCGCGGATACGGTTCAGGATCAAACGGGAGGTGGTGTGGAACTATCAGAAACTGTATTTACAGTAAGAAAACGCGGCACGGTTCATCCTATTTTATGGAAAACAAATACCGTTTATCGGAATTTGAGCAGCAAAGCCGAGGAAAATCCAGATTTTTACAATTGGAATCGAGTAAAAGTTCGTTATTGTGACGGGGCATTGTTTAGCGGAGACAGTCAAAATGAGGCAGCAGGGTTGTATTTCACAGGGCAGCGCATTTGGCAGGCTGCAATGGAAAATTTAATGTCGAAAGGAATGTGA 375 0.4347 MSIITSSSKLGPLVCLEDLYRLTTSIADTVQDQTGGGVELSETVFTVRKRGTVHPILWKTNTVYRNLSSKAEENPDFYNWNRVKVRYCDGALFSGDSQNEAAGLYFTGQRIWQAAMENLMSKGM* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3792 124 Pfam Pectinacetylesterase 60 124 IPR004963 GO:0016787
Psa3g3792 124 PANTHER PECTIN ACETYLESTERASE 2 67 124 - -
Psa3g3792 124 PANTHER NOTUM-RELATED 67 124 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3792 Psa-Chr3 338597390 338598639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3792 67 124 Carbohydrate Esterase AT2G46930 70.690 2.03e-26 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3792 K19882 - gmx:100817557 110.923