Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3781 ATGTTTCCTCTCTTATTCCTGCTCCTAAAACTACAAATCTTCCTCATACATGCTTCTCAATCTCTCTCTGAACATTACACTCTTATTGCCATCAAAGAATCTCTAGACCCTGAAAACCGTGTGTTGTTCTCATGGAACACTGATTCTGACCCATGTAGTGGAACTTTTGAAGGTGTTGCTTGTAATCAACAAGGTCTTGTTACTAATATTTCACTTCAAGGAAAAGGTTTATCTGGGAAAATACCTTCGGTTATTGGTAGTCTCAAGAGTTTGACTGGTCTTTACCTTCATTTCAATGCCTTGAATGGGATTTTGCCTAAGGAAATTGCAGGTTTATCTCAGCTTAGTGATTTGTATCTTAATGTTAATAATCTCTCTGGTGCTATCCCTCGTGAGATTGGTAACATGTCAAATCTTCAAGTTTTGCAGCTTTCTTATAATGAGCTTAATGGAAGTATACCTACGGAATTAGGAAGATTAGAGAAGCTAAGTGTTCTTTCACTCCAATATAATCACTTACGCGGCGCGATTCCTGCGAGTTTGGGTGAGCTAGAGAGACTTGAAAGATTGGATCTCAGCTTCAATACCCTTTTTGGTCCAATTCCAGTGACATTGTCTTATGCACCTAAACTACAGACTCTTGATGTTCGAAACAATTCACTCTCCGGAAACATCCCTCTAGATTTGAAAAGACTAGAAGAAGGGTTCAAGTATTCGAACAATCGTGGTTTATGTGGAACTGGATTTGCCAATTTAGATTCTTGTCAAATAGTAAGCAATTCAGATCCAATTAGACCAGAACCATATGTGCCTACAAAGAATTCTACAATTGATTATCCGACTTCGCCTGAACAAACGGCTAAAAACTGCGGCAATGCTGATTGTAGAAGGCGCTCAGAATCTTTGATAATTGCTTTGATTTTTGTGATGATTGGTGTAATTTTTGTTTCTTCTGTTACGGCACTATTTCTGATCTTACGATACCGTCGCCAGAAACAGAAGATTGGAAACACTGGTGAAATTTCTAATAGTCGTCGGCTTAGTACTGACAAGATCAAGGAAGTGTGCAGGAAGAACGCATCGCGCCTTATAAGTTTGGAGTATTCCAACGGATGGGATCCGTTATCCAGAAATCTCAGTGGTTACTCGCAAGAATTTCTCGAAAGCTTTATGTTTAATCTCGAAGAAGTAGACCGAGCAACTCAGTGCTTCTCGGAGCTAAATTTATTGACGAAGAGCAATATTTCGGCTAACTATAGAGGAATCTTGAGAAACGGATCTGTTGTGGTTATAAAGTGCGTTGCCAAGACAAGCTGCAAGTCTGATGAAACTGAGTTCTTGAAAGGCTTGAAGATATTAACTTCATTAAAGCACGATAATCTGGTTCGGTTGAGAGGCTTTTGCTGTTCGAAAGGCCGCGGGGAATGTTTTCTGGTTTACGATTTTGTTTCGAACGGGAGTTTGTCGAAGTATCTTGATGTTAAGAGAGGAAGTGATGAGGTACTTGAATGGTCCACTAGAGTCTCCATAATCCATGGTATTGCCAAAGGTATTGGTTATCTACACGGGAAAAAGGGAAGCAAGCATTATTCTCTAGTTCATCAGAATATATCAGCCGAAAAAGTACTTCTCGATTCTCGGTATAATTCCTTACTTGCAGATTCAGGATTGCACAAACTTCTTGCAGATGATGTTGTTTTCTCCACCCTCAAAGCTAGTGCTGCAATGGGGTATCTGGCACCAGAATACGCGACAACCGGTCGTTTTACCGAAAAAAGTGATGTGTATGCTTTCGGGGTGATAGTTTTCCAACTTCTCATTGGAAAACATGATATCACCCTATTAAGTCGTCAATGGGAAGAAACTGGTAATTTGAAAGATATTATCGATGAAAATCTTGAAGGAAATTTTTTAGAATCCGAGGCCGAGAAATTGGCGAGACTCGCTTTGGTTTGCACCAATGAATCTCCCCATCTCCGGCCGACTATGGAGGATATAATGAGAGAATTGTGTGATGATAAGTGGTAA 2028 0.3994 MFPLLFLLLKLQIFLIHASQSLSEHYTLIAIKESLDPENRVLFSWNTDSDPCSGTFEGVACNQQGLVTNISLQGKGLSGKIPSVIGSLKSLTGLYLHFNALNGILPKEIAGLSQLSDLYLNVNNLSGAIPREIGNMSNLQVLQLSYNELNGSIPTELGRLEKLSVLSLQYNHLRGAIPASLGELERLERLDLSFNTLFGPIPVTLSYAPKLQTLDVRNNSLSGNIPLDLKRLEEGFKYSNNRGLCGTGFANLDSCQIVSNSDPIRPEPYVPTKNSTIDYPTSPEQTAKNCGNADCRRRSESLIIALIFVMIGVIFVSSVTALFLILRYRRQKQKIGNTGEISNSRRLSTDKIKEVCRKNASRLISLEYSNGWDPLSRNLSGYSQEFLESFMFNLEEVDRATQCFSELNLLTKSNISANYRGILRNGSVVVIKCVAKTSCKSDETEFLKGLKILTSLKHDNLVRLRGFCCSKGRGECFLVYDFVSNGSLSKYLDVKRGSDEVLEWSTRVSIIHGIAKGIGYLHGKKGSKHYSLVHQNISAEKVLLDSRYNSLLADSGLHKLLADDVVFSTLKASAAMGYLAPEYATTGRFTEKSDVYAFGVIVFQLLIGKHDITLLSRQWEETGNLKDIIDENLEGNFLESEAEKLARLALVCTNESPHLRPTMEDIMRELCDDKW* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3781 675 Gene3D Transferase(Phosphotransferase) domain 1 483 674 - -
Psa3g3781 675 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 671 - -
Psa3g3781 675 Gene3D Ribonuclease Inhibitor 23 136 IPR032675 -
Psa3g3781 675 CDD STKc_IRAK 419 671 - -
Psa3g3781 675 SUPERFAMILY L domain-like 21 230 - -
Psa3g3781 675 Pfam Protein tyrosine and serine/threonine kinase 425 670 IPR001245 GO:0004672|GO:0006468
Psa3g3781 675 SUPERFAMILY Protein kinase-like (PK-like) 380 669 IPR011009 -
Psa3g3781 675 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 3 671 - -
Psa3g3781 675 Gene3D Ribonuclease Inhibitor 137 256 IPR032675 -
Psa3g3781 675 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Psa3g3781 675 ProSiteProfiles Protein kinase domain profile. 404 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3781 675 Gene3D Phosphorylase Kinase; domain 1 376 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3781 Psa-Chr3 334661195 334664651 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3781 7 517 Miscellaneous Gene Families AT4G22730 50.190 5.36e-168 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Psa3g3781 PK_Tyr_Ser-Thr 1.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3781 - - var:108327466 870.152