Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3753 ATGGGAGAGAGTTCTATGAACCTTATAGAAAGTACAACAAGAAACAACAAAATGGAAGAAGTTGAAAGAGAAGAAGAACAAGAACAAGAACAAGAAATGGATCCAGAAAGTAACAATCCACTACATCAGACACTGATCAAGAGAAACAGAACACTGTCTTCAAATCCACTTGCTCTTGTTGGTGAAAAAGTTTCCTACATAGAAAGCTTAGACTATGAGATAAATGAGAATGATCTATTCAAACATGGATGGAGAAGTAGATCAAGAGTTGAAGCATTACAATACATATTCTTGAAATGGTTACTTGCATTTCTTGTTGGATTTCTCACTGGTATTATAGCTACACTTATAAATCTTGCTGTTGAGAACATTGCTGGATACAAGTTTTTGGCTGTTATTAAATATATCAACGGAGAAAGGTACTTGACAGGTTTTCTATATTTTGCGGGAGTTAATTTCGTCTTAACATTTGTTGCTGCTATTCTCTGTGTGTGTTTTGCACCAACTGCAGCTGGACCTGGAATACCTGAAATCAAAGCTTATCTTAATGGTGTTGATACACCAAACATGTTTGGTGCTACAACATTAATAGTTAAGATAATTGGAAGCATTGGAGCTGTCTCAGCAGGCCTAGATCTTGGGAAAGAAGGACCCTTGGTACATATAGGAAGCTGCATTGCTTCCTTACTAGGCCAAGGAGGCCCTGACAATTACAGAATCAAGTGGCGCTGGCTACGATATTTCAACAATGATTGTGATCGTCGTGATCTTATCACCTGTGGTGCATCCTCAGGAGTTTGTGCAGCTTTTAGATCCCCTGTTGGTGGAGTTCTCTTCGCCCTTGAAGAGGTGGCAACCTGGTGGAGAAGTGCTCTTCTATGGAGAACATTTTTTTGCACCGCTGTTGTGGTGGTAGTGCTTAGGGCCTTCATTGAAATCTGCAACTCCGGGAAATGTGGCCTTTTCGGTTCAGGCGGGCTGATCATGTTTGACGTTAGCAATGTCACTGTTAGGTATCATGTGATGGATATCCTACCTGTTGTAGTCATTGGAATCATTGGTGGGTTATTGGGAAGCCTTTATAATCATCTCCTACACAAGGTCCTCAGACTCTACAATCTCATCAATCAGAAAGGAAAAATACATAAAGTCCTCCTAAGTCTTGCAGTAGTACTCTTCACATCTGCATGTCAATATGGTCTCCCATTCCTAGCAAAATGCACCCCTTGTGATTCATCGTTTCGAGACTCGGAATCTGTTTGCCCCACCAATGGAAGGTCTGGAAACTTTAAACAATTCAATTGTCCCCCTGGCCATTACAACGATCTTGCTACTCTGCTGCTTACCACTAATGATGATGCTGTCCGAAACATATTCTCAACAAACACACCTCATGAATACCAACCCTCCTCCCTCATAATTTTCTTTGTGCTATATTGCATATTAGGACTAATTACTTTTGGAATTGCTGTGCCGACGGGACTCTTCCTCCCAATCATCCTTATGGGCTCGGCCTACGGACGTCTTCTTGGTATGTTGATGGGACCTCATACAAAAATTGACCAAGGATTGTTTGCTGTACTTGGTGCAGCTTCCCTCATGGCTGGTTCGATGAGGATGACTGTGTCCCTTTGCGTGATCTTCCTTGAACTTACTAGCAATCTTCTCCTACTACCAATAACAATGATTGTTCTCCTAATAGCCAAAACTGTTGGAGATTGCTTCAACCCTAGCATCTATGAGATTATACTGCATTTGAAAGGCCTTCCTTTCATGGATGCAAATCCTGCGTCATGGATGAGAAACCTCACTGTTGGCGAGCTTGTAGATGTAAAGCCGGCAGTGATTTCCCTCCAAGGAGTAGAAAAGGTAGCAAAGATAGTAGATGTATTGAAAAACACTACACATAATGGTTTCCCAGTGATGGACGATGGGGTAGTACCGCCAACAGGACAGGCCAACGGGGCAACAGAATTGCATGGACTAATTCTAAGAGCACACCTTATCCAAGCATTAAAGAAGAAGTTCTTCTTGAAAGAGATAAGAAGAACAGAGGAATGGGAAGTGAGAGAGAAATTTACCTGGGTAGAGCTGGCCGAGAGAGAAGGGAAAATTGAAGAGGTAGCTATAACAAGAGAAGAAATGGAGATGTTTGTTGATCTACATCCTCTCACCAATACAACTCCATTTACTGTGCTAGAGAGCATATCAGTAGCAAAAGCAATGATCCTCTTCAGGCAAGTTGGACTTCGTCATCTGCTTGTCGTTCCGAAATACCAGGCATCAGGGGTATCCCCTGTTGTTGGGATTTTGACGAGACAGGATCTATTGGCCCACAACATTCTGACAGTGTTTCCTCACCTGGCAAAATCTAAAAGCAGACAGAAGAGAAATTGA 2397 0.4205 MGESSMNLIESTTRNNKMEEVEREEEQEQEQEMDPESNNPLHQTLIKRNRTLSSNPLALVGEKVSYIESLDYEINENDLFKHGWRSRSRVEALQYIFLKWLLAFLVGFLTGIIATLINLAVENIAGYKFLAVIKYINGERYLTGFLYFAGVNFVLTFVAAILCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRIKWRWLRYFNNDCDRRDLITCGASSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFCTAVVVVVLRAFIEICNSGKCGLFGSGGLIMFDVSNVTVRYHVMDILPVVVIGIIGGLLGSLYNHLLHKVLRLYNLINQKGKIHKVLLSLAVVLFTSACQYGLPFLAKCTPCDSSFRDSESVCPTNGRSGNFKQFNCPPGHYNDLATLLLTTNDDAVRNIFSTNTPHEYQPSSLIIFFVLYCILGLITFGIAVPTGLFLPIILMGSAYGRLLGMLMGPHTKIDQGLFAVLGAASLMAGSMRMTVSLCVIFLELTSNLLLLPITMIVLLIAKTVGDCFNPSIYEIILHLKGLPFMDANPASWMRNLTVGELVDVKPAVISLQGVEKVAKIVDVLKNTTHNGFPVMDDGVVPPTGQANGATELHGLILRAHLIQALKKKFFLKEIRRTEEWEVREKFTWVELAEREGKIEEVAITREEMEMFVDLHPLTNTTPFTVLESISVAKAMILFRQVGLRHLLVVPKYQASGVSPVVGILTRQDLLAHNILTVFPHLAKSKSRQKRN* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3753 798 MobiDBLite consensus disorder prediction 1 40 - -
Psa3g3753 798 Gene3D - 600 780 IPR046342 -
Psa3g3753 798 Coils Coil 9 34 - -
Psa3g3753 798 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 17 793 - -
Psa3g3753 798 CDD ClC_6_like 68 592 - -
Psa3g3753 798 SUPERFAMILY Clc chloride channel 77 594 IPR014743 -
Psa3g3753 798 PRINTS Chloride channel signature 168 185 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Psa3g3753 798 PRINTS Chloride channel signature 199 218 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Psa3g3753 798 PRINTS Chloride channel signature 263 282 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Psa3g3753 798 PRINTS Chloride channel signature 491 511 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Psa3g3753 798 PRINTS Chloride channel signature 523 539 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Psa3g3753 798 PRINTS Chloride channel signature 541 560 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Psa3g3753 798 PRINTS Chloride channel signature 579 593 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Psa3g3753 798 PRINTS Plant CLC chloride channel signature 73 81 IPR002251 GO:0005247|GO:0006821|GO:0016020
Psa3g3753 798 PRINTS Plant CLC chloride channel signature 284 292 IPR002251 GO:0005247|GO:0006821|GO:0016020
Psa3g3753 798 PRINTS Plant CLC chloride channel signature 298 308 IPR002251 GO:0005247|GO:0006821|GO:0016020
Psa3g3753 798 PRINTS Plant CLC chloride channel signature 316 323 IPR002251 GO:0005247|GO:0006821|GO:0016020
Psa3g3753 798 PRINTS Plant CLC chloride channel signature 443 459 IPR002251 GO:0005247|GO:0006821|GO:0016020
Psa3g3753 798 ProSiteProfiles CBS domain profile. 725 791 IPR000644 -
Psa3g3753 798 Pfam CBS domain 727 777 IPR000644 -
Psa3g3753 798 PANTHER CHLORIDE CHANNEL PROTEIN 17 793 - -
Psa3g3753 798 SMART cbs_1 614 673 IPR000644 -
Psa3g3753 798 SMART cbs_1 728 781 IPR000644 -
Psa3g3753 798 Pfam Voltage gated chloride channel 156 572 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Psa3g3753 798 CDD CBS_pair_voltage-gated_CLC_euk_bac 612 779 - -
Psa3g3753 798 Gene3D Clc chloride channel 91 594 - -
Psa3g3753 798 SUPERFAMILY CBS-domain pair 598 778 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3753 Psa-Chr3 327992761 327997954 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3753 34 792 Ion Channels AT3G27170 79.710 0.0 1231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3753 K05016 - gmx:100788620 1382.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3753 3 327992761 327997954 Psa3g3753 3 327992761 327997954 ECH