Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3751 ATGGATATCGACATGGATTTGGATATTAGCATGAAACTCTCTCTCTCTCTCTCTGAAATGGGAATCAACAAACTAGAGGATCTAAAATGGCACGAACATGACATCGCCATGCTACTTCAAGTTGTGGCTACTGAGGAAGATGTGTATCTTGTTTTTGAGAATGTTAACCTAAATCTTGAAAGATACATCACCAATCCCATGCTTAGCATTGACACACTTGAAAGATCTGTTCTACGTCAAGCTCTTTCTGGACTGGCATACCTCCATTCTCACAACATTGTACACGCAGATATCGATCCTTTTAGCATTCTCTTTAAATACACCCTAGAGGAACCTCCTGTGTTGGATAAGCTATGTGGTACGCCAACAGAAGAAACTTGGCCCGGCGTGTCTTCTATATGCAAATTTATTCAAGCATTTAACCCTCCAATACAGCCAAAGGATCTAGCTGAAGAGTTCCCTACCCTTGAACCTGTTGGTCTTGATCTTCTTTCGAAAATGCTTTGCCTGTGCCCAAATGGCAGGATTTCAGCTTATGAAGCTCTTGACCATCCGTATCTTCGACATTGA 570 0.4175 MDIDMDLDISMKLSLSLSEMGINKLEDLKWHEHDIAMLLQVVATEEDVYLVFENVNLNLERYITNPMLSIDTLERSVLRQALSGLAYLHSHNIVHADIDPFSILFKYTLEEPPVLDKLCGTPTEETWPGVSSICKFIQAFNPPIQPKDLAEEFPTLEPVGLDLLSKMLCLCPNGRISAYEALDHPYLRH* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3751 189 ProSiteProfiles Protein kinase domain profile. 1 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3751 189 Pfam Protein kinase domain 25 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3751 189 Gene3D Transferase(Phosphotransferase) domain 1 113 189 - -
Psa3g3751 189 SUPERFAMILY Protein kinase-like (PK-like) 31 188 IPR011009 -
Psa3g3751 189 SMART serkin_6 1 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3751 189 Gene3D Transferase(Phosphotransferase) domain 1 31 112 - -
Psa3g3751 189 PANTHER CELL DIVISION PROTEIN KINASE 118 188 - -
Psa3g3751 189 PANTHER CELL DIVISION PROTEIN KINASE 18 106 - -
Psa3g3751 189 PANTHER CYCLIN-DEPENDENT KINASE A-2 118 188 - -
Psa3g3751 189 PANTHER CYCLIN-DEPENDENT KINASE A-2 18 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3751 Psa-Chr3 327976546 327979362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3751 117 187 Core Cell Cycle Gene Families AT3G54180 50.704 1.33e-15 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Psa3g3751 Pkinase 2.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3751 K02206 - gmx:100804719 107.457