Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3746 ATGGCAGATTCAATCACTACCATTAAAGCTTGGACTTACTCTGAATACGGCAACGCCGTTGATGTTCTAAAGTTTGATCCAAACGTGGCTTTACCTTATGTGAAAGATGATCAAGTTCTCATCAAAGTTGCTGCTGCTTCTCTTAATCCCATTGATTATAAGAGATTGAATGGCGCCTTCAAAGCCTCTGACTCTCCTTTACCGACTGCTCCGGGGTATGATGTATCTGGAGTTGTGGTGAAGGTAGGGAGTGAAGTGAAGAAATTTAAGGTCGGGGATGAAGTTTATGGTGATATCAATGAGAAAGCTTTGGAATATCCAAAGGTGATTGGCTCACTGGCTGAGTATACTGCTGCAGAAGAGATAGTGTTGGCTCACAAGCCGAAAAATTTGAGCTTTGCTGAAGCTGCTAGTCTTCCTTTAGCAATTGAGACTGCTTATGAGGGCCTTGAACGATCCGGCTTCTCTGATGGTAAATCTATACTTGTTCTTGGCGGTGCCGGTGGAGTTGGAACCCATATCATTCAGCTTGCCAAACATGTTTTTGGTGCTTCCAGAGTCGCAGCTACATCTAGCACCAAGAAACTAGAATTGTTAAGAGAGTTAGGAGCTGATTTGCCTATTGATTATACAAAGGAGAATTTTGAAGAGTTGGCTGAGAAGTTTGATGTGGTGTTTGATACAGTCGGGGAAACTGAGAAGGCATTCAAGGCTGTGAAAGAAGGTGGCAAAGTTGTGACAATTGTGCCGCCAGGAATTCCACCAGCAATAGTGTTCATACTTACTTCAAATGGGGCTATCTTAGAGAAACTAAAGCCTTATTTGGAGAGTGGAAAGGTGAAGGCAGTGCTTGATCCCAAAAGTCCATTTCCATTTTCTCAAGCTGTTGAAGCATTTTCCTATCTCGAAACTGGCAGAGTTACTGGAAAACTAGTTATCCATCCCATACCATGA 954 0.4287 MADSITTIKAWTYSEYGNAVDVLKFDPNVALPYVKDDQVLIKVAAASLNPIDYKRLNGAFKASDSPLPTAPGYDVSGVVVKVGSEVKKFKVGDEVYGDINEKALEYPKVIGSLAEYTAAEEIVLAHKPKNLSFAEAASLPLAIETAYEGLERSGFSDGKSILVLGGAGGVGTHIIQLAKHVFGASRVAATSSTKKLELLRELGADLPIDYTKENFEELAEKFDVVFDTVGETEKAFKAVKEGGKVVTIVPPGIPPAIVFILTSNGAILEKLKPYLESGKVKAVLDPKSPFPFSQAVEAFSYLETGRVTGKLVIHPIP* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3746 317 Gene3D - 150 264 - -
Psa3g3746 317 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 131 257 IPR036291 -
Psa3g3746 317 SUPERFAMILY GroES-like 5 165 IPR011032 -
Psa3g3746 317 Pfam Zinc-binding dehydrogenase 202 313 - -
Psa3g3746 317 SMART PKS_ER_names_mod 18 313 IPR020843 GO:0016491
Psa3g3746 317 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 5 317 - -
Psa3g3746 317 Gene3D - 15 313 - -
Psa3g3746 317 CDD MDR_like_2 9 313 - -
Psa3g3746 317 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 5 317 IPR044626 GO:0016628
Psa3g3746 317 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 158 179 IPR002364 GO:0008270|GO:0016491
Psa3g3746 317 Pfam Alcohol dehydrogenase GroES-like domain 37 99 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3746 Psa-Chr3 326763013 326764745 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3746 68 254 Monolignol Biosynthesis Gene Families AT4G37980 26.147 8.01e-08 51.2