Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3735 ATGCCTCCAAAGAAGAAGCAGCAGCGAGAAGAAAAAGTGGAAAACCCTAAAATCCTTCCAAAGAAGAAGACCAACACTTCATCGGTATCTTCTTCTTCATCTACTAAGAAACCCATCCCACAACCTTCCAAATACGGTATTCAACACTTCTTCGATCGCCACACAATCCAACACTCTCAGAAACAGCAAGCCAACAACTCAACCTCTCAGGTTGATTCTGTTTCTCTCCCACCGCCGGAGAAACCCAACTACGGTAAGGCTCCCTCTTCGCAGGATGTTACTCCCGATAATCTGGTGTTGCCGGTGGCCACTGATCCCACCGAGGTGTCTCCGGAAATTTCAAAGTCCATGTCACGCAAGCGGTTCAAATTCTCACCTGGAATGTTTATCAAGCAAAGTCAGGATGATGGGGCTGATGAGGTTACATGGAAGATATCTCCAGTGAATGAAAGGCTTCAAGCAGTTTCAAAACACATGCCTAAGATGATTCAAGCATTGGCTGATTCTTCGAGGACTAGCATGTTGCAAATTCGCCACTGCTCAGTAGATAAGACTTCTTTGGACAAAGGCGACAAGGTTGAAGAGTTGCTTACTACACCAACTCCTACTGCATCTGCAAAAGCTCCGTTGTCATTGAGTAAGTTAGGCCTGAAAAGATTTAACCGTGAACGTGATGTGGTAGTTAATGGCAATCAAACTACTGTGAGCAACTCTTCTGGAGTGGCTGGTGAAAGAAATCCCTTCAGAACTCCACCATCCATGTCATGTCGCCTAGATAAGCTTGCCAAGGATGTTGAGCACATTGGACCATCTGACCAGCCTTTTTTGAGGCAGCACAAAAAGGCATTGCTTGAACTTTTAGATCAAGTTGAAGATGCAATTGGTGTTGATAATGATACAGTTTGTGATAAAACCACTCATTCCTTTAAATCACAAGATGGCATTGCTAACGAGCTCCCTGTCAGAGTCAACCATCTAGTTGAAAGTACTAAATCACATATACCTAAAGAGGTTGTTGGTGATTTCTCCAATTCTAATTATTTGGTTTTGGAGGCATCTGAAAAATCGCAACCTGCTGATTCATCTGCTGCTGAAGGTCCATACAAGGTGCTTCGTTTACTAAATGAACAAACTGGAGAAGAGCGAGCTATAAACTTGTGGGATGAATGGTCTTACAGTGTAATTGCACCTGGAGATACCGTGAACGTAATTGGTCAATTTGATGAAGGGGGAAATTGTGATATTAATCATGATAATAATTTTTTGATTGTACACCCAGATATTCTTGTGTCTGGAACACGGGTTGCTGCCAGTTTTAGTTGCCCAAGAAGAACCGTCTTAGATGAGAGGCTAAAAAGCAGTGAGTACTCAACTGCAGCTTTATGTGGAACGTTGCTTCACCAAATATTTCAGGCTGGACTTACAAATGACAATCCTACAATAAACTTTTTGGAATGTTATACAGAAGTGGTTTTAAAAAAAAATGTTGAAAGCTTGTTTGCATGTGGAGTAAATGAAAAGGATGTTCGCAAAACCATGATTGATGGTATCCCTAGAATATATAATTGGATCATGCTGTTCAGAAATATGGAGGAAAGAGAAGACCCTAATGTTAATTTTGGATGTGCTAATGGAATGAAGAACGTTGGCGTATCTGAGGTAATTGATATTGAAGAAATGGTATGGGCACCAAAATATGGTCTGAAAGGGATGATTGATGCTTCACTTAGAGTGAAGGTTCAATCTAGAAAAGATAAACCAGAGGAGAAGATCATGCCATTAGAGTTTAAAACTGGAAAATCACCCAGTAGCCAGACATCCGTAGAACATAATGCCCAAGTAATTTTGTACACTCTCCTGATGTCTGAAAGGTACCAGAAGACCATTGATTCTGGTCTTCTGTATTATCTCCAAACAGATCAGACACAGGGCATTACAGTTCAAAGATCCGACTTAGTTGGGTTGATAATAAGGCGTAACGAGCTAGCAAGTGATATTCTCAAGGCATTAGTCTTGCAGCAACTTCCACCAGTGTTACAGAGTTCTAGCATGTGCAGAGGTTGTCGCCATCTTAATGCATGTAGCATTTATCACAAGGCGCATGGTGGAAGTATCAAGAGCAATGGATTGGGAGATGTTTTCGATTCCAATACTAAGCACTTGACTTCATCTCATTTTAAGTTCCTCTGCCATTGGGACCATTTGATTGACTTAGAAGCTAAAGGGACTGAGTTTTTAAAGAAAGACATGTGGCGGTCGTATAATTTGAGGACCCGCAGTGCCGGTGGTGTTTCTTCTATTGTTATTGATGCTTCACAAGGAATACCTTATTCAAAATCTCATGAAGATAATCGTTTCGTTTATCGTTTTGTACCGCACGATACTTCTTGTTCCTCTATAGTTTCTGATGATGATCCTTCTAGTGTCTCGTTGAAAATTGATTTAGATGTCACACTTAGAAGTGGTGACTTTGTGATATTGAGTAACGAGTCAAGCCATCAAACTATTGCACGAGGAGTAATTTTAGATACTAGCAAGAATCATATAACTGTTTCCTTTTCCAAGCTTTTGAGAATTCCCGGGAGGTCTTCCACAGAACATGATCTCCTTAAGCAGGTTTGGAGAATTGACAAAGATGAAGCTGTGACCTCGTTTGCAATTATGAGGTTTAATCTAGTACAACTTTTTCTACAAAATGATCAAAATGCTCATCTTCGAAGGATGATTGTTGACCTTGAGGCTCCTAGATTTGACAGTGGTTCTATAGTTAGTCAGGATCCTGCAATATCTTACGTTTGGTCTGAGCAGAGTTTGAATGATGATCAACGTAGAGCTATTCTCAAGATACTTGTGGCAAAAGATTATGCACTTATCTTAGGGATGCCTGGAACAGGGAAGACATCAACCATGGTCCATGCTGTGAAAGCCTTGTTGATTAGAGGCACATCCATTTTACTGACAGCCTATACAAATTCTGCTGTTGATAACTTACTAATCAAATTAAAAGCACAGGGGATTGATTTTGTTCGGGTTGGAAGACATGAAGCAGTGAATGAAGAGGTCAGAGAGCACTGCCTCTCAGAAACAAATGTACAGTGTGTTGAAGATATCAAAATAAGGTTAGAACAAGTCAAAGTTGTTGCAGTTACATGTTTGGGTATTTCCAGTCCCCTGCTTGCCAACAAGAGATTTGATGTATGCATTATGGATGAAGCCGGGCAGACAACTCTGCCAGTGTCCTTGGGCCCTCTAAGATTTGCTTCAATGTTTGTTCTTGTGGGGGATCATTATCAACTGCCACCACTTGTCCAGAGTACAGAGGCTCGAGAAAATGGCATGGGGATGAGTTTGTTTTGTAGGCTTTCAGAAGCTCATCCACAGGCAATTTCAGCTTTGCAGAGTCAGTACCGTATGTGTCAGGGTATTATGGACTTGTCAAATGCCTTGATATATGGTGACAGATTGAGGTGTGGTTCATCTGAGATAGCTAATGCCAAACTTGAGTTTTCTGGCTTAAACTGCTGTTTGCCTTGGCTAGAAGATGTTTTGAATCCTGGAAGGCCAGTGATATTTATTGATACTGATATGTTGCCTGCCTTAGAAGAAAGAGATCAGAAAGCTGTAAATAACCCTACTGAAGCTCACATAATTGCCGAGGTTGCAAAGGAATTGGTAAAAAATGGGATTGGGGGAGATAACATTGGCATTATTACTCCCTATAACTCACAGGCTAACCTCATCCGACATGCTACTTGCATAACATCCTTGGAGATACATACCATTGACAAATATCAGGGTAGAGATAAGGACTGTATATTAGTATCTTTTGTACGGTCTTGTAAGAATCCAACTAGCTGCGTGGCTTCTCTTCTCGGAGACTGGCACAGGATAAATGTGGCCCTTACTCGTGCTAAGAGAAAGTTGATCATGGTGGGGTCTCGCAAAACTCTATTCAAGGTACCACTACTGAAGCTTCTCATTAAGAAAGTTGAAGAGCAATCTGGAATTTTAACTGTGTCTAAAAACGATATCTATAGAGAAGGGGAGCTCATTAGATGTTCTCAAATTGCTTGTTCAAAACAAACATTAGATATTCACAAGTGA 4104 0.4094 MPPKKKQQREEKVENPKILPKKKTNTSSVSSSSSTKKPIPQPSKYGIQHFFDRHTIQHSQKQQANNSTSQVDSVSLPPPEKPNYGKAPSSQDVTPDNLVLPVATDPTEVSPEISKSMSRKRFKFSPGMFIKQSQDDGADEVTWKISPVNERLQAVSKHMPKMIQALADSSRTSMLQIRHCSVDKTSLDKGDKVEELLTTPTPTASAKAPLSLSKLGLKRFNRERDVVVNGNQTTVSNSSGVAGERNPFRTPPSMSCRLDKLAKDVEHIGPSDQPFLRQHKKALLELLDQVEDAIGVDNDTVCDKTTHSFKSQDGIANELPVRVNHLVESTKSHIPKEVVGDFSNSNYLVLEASEKSQPADSSAAEGPYKVLRLLNEQTGEERAINLWDEWSYSVIAPGDTVNVIGQFDEGGNCDINHDNNFLIVHPDILVSGTRVAASFSCPRRTVLDERLKSSEYSTAALCGTLLHQIFQAGLTNDNPTINFLECYTEVVLKKNVESLFACGVNEKDVRKTMIDGIPRIYNWIMLFRNMEEREDPNVNFGCANGMKNVGVSEVIDIEEMVWAPKYGLKGMIDASLRVKVQSRKDKPEEKIMPLEFKTGKSPSSQTSVEHNAQVILYTLLMSERYQKTIDSGLLYYLQTDQTQGITVQRSDLVGLIIRRNELASDILKALVLQQLPPVLQSSSMCRGCRHLNACSIYHKAHGGSIKSNGLGDVFDSNTKHLTSSHFKFLCHWDHLIDLEAKGTEFLKKDMWRSYNLRTRSAGGVSSIVIDASQGIPYSKSHEDNRFVYRFVPHDTSCSSIVSDDDPSSVSLKIDLDVTLRSGDFVILSNESSHQTIARGVILDTSKNHITVSFSKLLRIPGRSSTEHDLLKQVWRIDKDEAVTSFAIMRFNLVQLFLQNDQNAHLRRMIVDLEAPRFDSGSIVSQDPAISYVWSEQSLNDDQRRAILKILVAKDYALILGMPGTGKTSTMVHAVKALLIRGTSILLTAYTNSAVDNLLIKLKAQGIDFVRVGRHEAVNEEVREHCLSETNVQCVEDIKIRLEQVKVVAVTCLGISSPLLANKRFDVCIMDEAGQTTLPVSLGPLRFASMFVLVGDHYQLPPLVQSTEARENGMGMSLFCRLSEAHPQAISALQSQYRMCQGIMDLSNALIYGDRLRCGSSEIANAKLEFSGLNCCLPWLEDVLNPGRPVIFIDTDMLPALEERDQKAVNNPTEAHIIAEVAKELVKNGIGGDNIGIITPYNSQANLIRHATCITSLEIHTIDKYQGRDKDCILVSFVRSCKNPTSCVASLLGDWHRINVALTRAKRKLIMVGSRKTLFKVPLLKLLIKKVEEQSGILTVSKNDIYREGELIRCSQIACSKQTLDIHK* 1368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3735 1367 Gene3D - 1035 1135 IPR027417 -
Psa3g3735 1367 Gene3D - 863 1034 IPR027417 -
Psa3g3735 1367 MobiDBLite consensus disorder prediction 20 41 - -
Psa3g3735 1367 Gene3D - 1136 1349 IPR027417 -
Psa3g3735 1367 MobiDBLite consensus disorder prediction 57 76 - -
Psa3g3735 1367 Pfam DNA replication factor Dna2 376 577 IPR014808 -
Psa3g3735 1367 CDD SF1_C_Upf1 1138 1331 IPR041679 -
Psa3g3735 1367 Pfam AAA domain 1114 1314 IPR041679 -
Psa3g3735 1367 PANTHER DNA2/NAM7 HELICASE FAMILY 105 1349 IPR045055 -
Psa3g3735 1367 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 937 1323 IPR027417 -
Psa3g3735 1367 PANTHER DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2-LIKE 105 1349 - -
Psa3g3735 1367 CDD DEXXQc_DNA2 937 1137 - -
Psa3g3735 1367 Gene3D - 431 695 IPR011604 -
Psa3g3735 1367 MobiDBLite consensus disorder prediction 1 19 - -
Psa3g3735 1367 MobiDBLite consensus disorder prediction 1 95 - -
Psa3g3735 1367 Pfam AAA domain 938 1028 IPR041677 GO:0004386
Psa3g3735 1367 Pfam AAA domain 1041 1105 IPR041677 GO:0004386
Psa3g3735 1367 Pfam Domain of unknown function DUF83 587 695 IPR022765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3735 Psa-Chr3 325636687 325653342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3735 1 1079 Core DNA Replication Machinery Family AT1G08840 54.330 0.0 1101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3735 K10742 - gmx:100799415 1783.07