Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3728 ATGAAGGCTATGCCCTTACCTTTTGAAGAACACATAGGAAAAGGGGTGTTGGATTTTGGTTCAAGTGTTGGTAGTGTTGTTTCAGATTCGTTCTTATTTCAACAACAGCAACAACAGTTTCTACAAAGGTGGAGGGAAAATTGTTGCTATGCGGGCATTGAGCCCAATTCTGTTGATGTTTTTGACCTCAAAAAACCAAATCCAGAAGCCACTCCTACTTCATCCTCAACGCTGTCTTCCTCACACGGCAGCGCCGCCGGAGGCGCTTCAGCCGATAGCAACAACAAGAACATACCTGAAGTTGAAGGAAAAAGATGTGGAATGGAAGATTGGGAGAGTGTGTTGTCTGAATCACCAAGTCAAGATCAAGATCATTCAATTTTGAAATTGATTATGGAAGATATTGAAGATGCATCTATGGGATTAAGCAAGCTTTTACAAGTTGGGACTAGTAATTCTCATTCTCATTCTCAGCAAGATGTTGAATTCAATGGTTTTAGTTTTATGGATCAACAAAGTTCTGTACTTGATCCTATTTCTTCAAATGTTAACAACAACAACTTTGTAACTAGCATTGATTCTTCGTCGGTTGTTGCTTCTACGGCTACTGAGATTTGTTCTGATTTCCCTTTTGGTAGAGTGATGAATCAAATTCAAAACCCTATTTTCAATTCTTCACTCTCTCATAGTGGTTTGTTTCATCATCAACAACAACCAATTGAGTCTCTTGATGAGAAGCTACCTCAATTTGTTATGAACCAAAGCCAAACTCAGTTTATGCCTAACCCTAGTTTGGTTTTTCCTTTCACATATTCTCAGCTGCAAGAGAATCAAGAGATTCATCCTCAGCCACCGGCGAAAAGACTCAATTGCGGAAATAATTATGAAATTCCGAAGATGCCATTTTTGGATTCTGGTCAAGAGATGTTTCTTAGGCGGCAGCAACATCAACAACAGCATCATCATCAGCAGCAGCTTCAACTACTTCCACACCATCTGCAGCAGAGGCCAATGGCGCCGAAGCAGAAAATGGGGAACCCTGGAAGCGGCGGCGGCGAAGATGCGGCAGGGAACAATCAGTTCCAGCAAGCTATAATTGATCAGCTTTTCAAGGCTGCAGAACTTATAGAAGCCGGTAATCCGGAACTCGCGCACGGGATATTGGCGCGGCTCAATCACCAAATTTCTCCCATTGGGAAGCCTTTTCAAAGGGCTGCTTTCTATTTCAAGGAGGCATTACAATTGCTTCTTCAATCGAATGTCAACAGCAACAACAACAACAGCTTTTCGCCTACGGGGCTATTGCTCAAGATTGGTGCTTATAAATCATTCTCAGAAATCTCACCGGTTCTGCAGTTTGCTAATTTCACTTCCAACCAAGCATTGCTTGAAGCTGTGGAAGGTTTCGATCAAATTCACATAGTAGATTTTGATATCGGTTTCGGTGGACAATGGTCTTCTTTTATGCAGGAGTTAGCACTCAGGAACGGCGGTGCACCTTCACTTAAGATCACTGCATTTGTTTCACCCTCTCACCACGACGAAATCGAGCTTAGTTTCACTCACGAGAATCTGAAACAATATGCTGGTGAAATTAACATGTCCTTTGAGCTTGAGATTCTGACACTCGACTCTCTGAATTCTGTATCATGGCCGCAGCCACTTCGCGACTGCGAAGCAGTTGTTGTTAACTTGCCTATTTGCTCTTTCTCAAATTACCCTTCGTACCTTCCTTTGGTGCTTCGATTCATGAAGCAGCTCATGCCAAAAATTGTGGTTACGTTGGATAGGAGTTGCGATCGAACCGACGCACCGTTTCCTCAGCATATGATTCTCGCTATCCAGTCTTATTCGGGTTTGCTCGAGTCACTTGACGCTGTCAGTGTTAACGTTCACCCAGATGTACTTCAAATGATCGAGAAATACTATCTTCAACCAGCCATTGAGAAGCTTGTTTTGGGCCGTCTGCGTTCACAGGACCAAACACTTCCTTGGAAAAATCTTCTCTTGTCGTCGGGGTTCTCACCATTGACGTTTAGTAACTTTACCGAGTCACAAGCCGAGTGTTTGGTGCAGAGGATTCCCGGCAGGGGATTCCACGTCGAGAAGAAGCAGAATTCACTCGTGTTATGCTGGCAAAGGAAGGATCTCATCTCGATTTCAACTTGGAGATGCTGA 2178 0.4339 MKAMPLPFEEHIGKGVLDFGSSVGSVVSDSFLFQQQQQQFLQRWRENCCYAGIEPNSVDVFDLKKPNPEATPTSSSTLSSSHGSAAGGASADSNNKNIPEVEGKRCGMEDWESVLSESPSQDQDHSILKLIMEDIEDASMGLSKLLQVGTSNSHSHSQQDVEFNGFSFMDQQSSVLDPISSNVNNNNFVTSIDSSSVVASTATEICSDFPFGRVMNQIQNPIFNSSLSHSGLFHHQQQPIESLDEKLPQFVMNQSQTQFMPNPSLVFPFTYSQLQENQEIHPQPPAKRLNCGNNYEIPKMPFLDSGQEMFLRRQQHQQQHHHQQQLQLLPHHLQQRPMAPKQKMGNPGSGGGEDAAGNNQFQQAIIDQLFKAAELIEAGNPELAHGILARLNHQISPIGKPFQRAAFYFKEALQLLLQSNVNSNNNNSFSPTGLLLKIGAYKSFSEISPVLQFANFTSNQALLEAVEGFDQIHIVDFDIGFGGQWSSFMQELALRNGGAPSLKITAFVSPSHHDEIELSFTHENLKQYAGEINMSFELEILTLDSLNSVSWPQPLRDCEAVVVNLPICSFSNYPSYLPLVLRFMKQLMPKIVVTLDRSCDRTDAPFPQHMILAIQSYSGLLESLDAVSVNVHPDVLQMIEKYYLQPAIEKLVLGRLRSQDQTLPWKNLLLSSGFSPLTFSNFTESQAECLVQRIPGRGFHVEKKQNSLVLCWQRKDLISISTWRC* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3728 725 MobiDBLite consensus disorder prediction 68 97 - -
Psa3g3728 725 PANTHER SCARECROW-LIKE PROTEIN 6 15 724 - -
Psa3g3728 725 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 724 IPR005202 -
Psa3g3728 725 Pfam GRAS domain family 366 724 IPR005202 -
Psa3g3728 725 ProSiteProfiles GRAS family profile. 356 724 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3728 Psa-Chr3 323950988 323954908 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3728 318 725 GRAS Transcription Factor Family AT4G00150 54.501 1.35e-140 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa3g3728 GRAS 7.2e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3728 - - gmx:100805945 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3728 3 323950988 323954908 Psa3g3728 3 323950988 323954908 ECH