Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3712 ATGGCGACCTCTTTTAATCCACCAATCGCCTTTCGCTTCCTCAAACCGCCACTTTCCTCTTTTCCTTCACAATCATCCTCACTTTCCCATTGTCTCCCTCAATCGCATTACACCTTCAAATTCCCAACCACTTGCTGCCGTTACTCATCTCTTGAAGTCAAAGATGTTAGTTATCAACCTCCAGGGACTCAGCCTAATCTTCTCAATTCAGTTAGTTTTTCTCTTCCAGAGAAAAGTTTTGGTCTAATTTTTGGACAGAGTGGAAGCGGAAAAACAACACTTTTGCAGCTTCTTGCAGGAATAAGCAAACCAACATCTGGATCTATTTACATCCAAAAATATGGAGATGATGGAAATCCTAGTCAATCTCCGGAGCCCTTGGTGCCAGAAAGGGTTGGTATTGTCTTCCAGTTTCCAGAGAGGTATTTTGTTGCTGATACTGTACTTGATGAAGTCACTTTTGGGTGGCCAAGGCAAAAGGGTAATGATCAAGTAAGGGAGAAACTTGCTCTAGGGCTTCAGAGGGCAATTAACTGGGTTGGATTAAGTGGGATATCATTGGATACGAATCCTCACTCCCTCAGCGGTGGTTACAAACGTCGCCTTGCCTTGGCAATACAGTTAGTGCAAGTCCCTGATTTATTAATATTGGATGAGCCTCTTGCTGGACTTGATTGGAAAGCACGTGCGGATGTCGTGAAGCTTTTAAAGCATCTAAAAAAAGAATTAACTGTGCTAGTTGTCAGCCATGACTTGAGCTGA 762 0.4318 MATSFNPPIAFRFLKPPLSSFPSQSSSLSHCLPQSHYTFKFPTTCCRYSSLEVKDVSYQPPGTQPNLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISKPTSGSIYIQKYGDDGNPSQSPEPLVPERVGIVFQFPERYFVADTVLDEVTFGWPRQKGNDQVREKLALGLQRAINWVGLSGISLDTNPHSLSGGYKRRLALAIQLVQVPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHDLS* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3712 253 PANTHER ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC 40 252 - -
Psa3g3712 253 SMART AAA_5 77 252 IPR003593 -
Psa3g3712 253 Gene3D - 44 253 IPR027417 -
Psa3g3712 253 PANTHER HEAVY METAL TRANSPORTER 40 252 - -
Psa3g3712 253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 253 IPR027417 -
Psa3g3712 253 Pfam ABC transporter 68 221 IPR003439 GO:0005524
Psa3g3712 253 CDD ABC_cobalt_CbiO_domain1 52 253 IPR015856 GO:0005524|GO:0016020|GO:0055085
Psa3g3712 253 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 51 252 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3712 Psa-Chr3 320872510 320879491 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3712 51 253 Calmodulin-binding Proteins AT2G36910 27.619 6.03e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3712 - - vun:114196181 369.007