Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3706 ATGGGAGGTATCAGTCTTGAAGAGATAAGAAACGAGAACGTTGATTTGGAACGGATTCCGGTGGAGGAAGTGTTTGAGCAGCTGAAATGTTCAAAAGAAGTTGCTGCTATTATGGAGATTCCTTTGGCTAATGAAAGTGGAAGACCTCCTGATTGGCAGGATTTCGTTGGTATTATTTCTCTCTTGGTTATTAATTCAACTATCAGTTTCATTGAAGAGAATAATGCTGGAAATGTTGCTGATGCTCTCATGGCTAGTTTAGCTCCCAAAACAAGGGTTCTCAGAGATGGTCGTTGGTCTGAAGAAGATGCTGCAATCTTAGTCCCAAGTGATATAATCAACATTAAATTAGGAGATATCATTCCTGCAGATGCTCGTCTTCTTGAGGGAGATGCTTTGAGTGTTGATCAGTCGACTTTAACTGGAGAATCTCTTCCGACAACAAAGAATCCATCAAATGAAGTCTTTTCTAGATCAACTGTTAAGAAAGGTGAGATTGAAGCAGTTGTTATTGCTACCGGAGTGCACACATTTTTCGGTAAAGCTTCCCGCCTTGTTGACAACACAAACCAACTCGTTGTCATGTATCCGATTCAACACCACAAGTATAGAGATGGATTTGACAATCTTTTGGTTCTATTGATCGGTGGAATTCCAATTGCTATGCCAACTATTTTGTCTGTTACTATGGCTATTGGTTCTCACAGGATTTCTCAGCAAGGTGCAATTACAAAGAGAATGACAACTATTGAGGAAATGGCAGGAATGGATGTTCTCTGTAGTGACAAAACCGAGACTCTGACCTGA 807 0.404 MGGISLEEIRNENVDLERIPVEEVFEQLKCSKEVAAIMEIPLANESGRPPDWQDFVGIISLLVINSTISFIEENNAGNVADALMASLAPKTRVLRDGRWSEEDAAILVPSDIINIKLGDIIPADARLLEGDALSVDQSTLTGESLPTTKNPSNEVFSRSTVKKGEIEAVVIATGVHTFFGKASRLVDNTNQLVVMYPIQHHKYRDGFDNLLVLLIGGIPIAMPTILSVTMAIGSHRISQQGAITKRMTTIEEMAGMDVLCSDKTETLT* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3706 268 PANTHER PLASMA MEMBRANE ATPASE 1 32 - -
Psa3g3706 268 PANTHER PLASMA MEMBRANE ATPASE 33 192 - -
Psa3g3706 268 PANTHER PLASMA MEMBRANE ATPASE 192 268 - -
Psa3g3706 268 Gene3D - 89 173 - -
Psa3g3706 268 Gene3D - 257 268 IPR023214 -
Psa3g3706 268 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 58 268 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa3g3706 268 Pfam E1-E2 ATPase 87 190 - -
Psa3g3706 268 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 255 IPR023298 -
Psa3g3706 268 PANTHER CALCIUM-TRANSPORTING ATPASE 1 32 - -
Psa3g3706 268 PANTHER CALCIUM-TRANSPORTING ATPASE 33 192 - -
Psa3g3706 268 PANTHER CALCIUM-TRANSPORTING ATPASE 192 268 - -
Psa3g3706 268 SUPERFAMILY Calcium ATPase, transduction domain A 89 186 IPR008250 -
Psa3g3706 268 Gene3D - 51 256 - -
Psa3g3706 268 PRINTS P-type cation-transporting ATPase superfamily signature 136 150 - -
Psa3g3706 268 PRINTS P-type cation-transporting ATPase superfamily signature 260 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3706 Psa-Chr3 319806298 319807311 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3706 4 268 Primary Pumps ATPases AT2G07560 63.772 3.36e-128 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3706 K01535 - gmx:547525 427.943