Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3704 ATGTTCAACTCAAAGTTTCTTAATTCAAGTGGAAGCAAGTTATTGGGCAATCAAAATCAACATGCTATCACCCACGGTGAAAGAAACTCCTTTACTGAACAAACAATACAACTTGCTTGTGTTTTCACTGAAGAAGCATGTGGAGATGGAGATTGGGCTCACGGAAGTTTTCCACTCGAGGAATATATTAAGGCTCTAGACCGTTCCAAGGATGAGATGTACTATAATCACTGTCTCGGTATGCGATATAGTAAGATTACTGAGCAAATATATGTGGGATCCTGCATACAAACAGACGATGATGTGGAAGCCTTGTCAAAAGTTGAGGGAGTTACTGCTGTTCTGAACTTTCAAAGTGGAACTGAAGCTGAAAATTGGGGAATCAATGTAAAATCAATCAATGACTCTTGTCAAAGGAATAATATTCTCATTATCAACTATCCTATACGGGACGGAGATTCTTATGACATGAGAAAAAAACTCCCATTTTGTGTCGGGCTTTTATTACGGTTGCTAAGAAAGAATCTTCGTGTTTTTGTTACCTGCACTTCTGGATTTGACCGGTCTCCTGCTTGTGTGATTGCATACCTACATTGGATGACAGACGTTTCCCTTCATGCAGCCTATACTTGGGTCACTGGGATGCACACCTGCAGGCCTGACAGGCCGGCAATTGCATGGGCAACATGGGATCTTATAGCTATGGTTGAAAGGGGCGAACATAATGGTCCTCCCACACACGCTGTCACATTTGTGTGGAATGGTCATGAGGGAGAGGATGTAAATTTGGTTGGAGACTTTACCGTAAATTGGAAAGAACCCCTTAAGGCAAAGCATCGGGGTGGATCAAGACATGAAGTAGAAGTTAAACTTCCACAAGGAAAGTATTACTACAAGTTTATTGTTAATGGACAATGGAAGCATTCAACATCTTCACCGGCTGAAAGGGATGAAAGCGGAAATGTTAACAATATAATTATAATCGGTGAAACTGCCAGTGTTCGTCCTTCTGTTCAGCACCAGCAAAAAGATGCCAACGTTGTAAAGGTGATGGAAAGGCCTTTGAATGAGAAAGAGCGGTTTATGTTGGCAAAAGCTGCTCGTTGTATTGCTTTCTCTATCTGCCCTCTCAGATTAGCTCCCAAATAG 1149 0.4169 MFNSKFLNSSGSKLLGNQNQHAITHGERNSFTEQTIQLACVFTEEACGDGDWAHGSFPLEEYIKALDRSKDEMYYNHCLGMRYSKITEQIYVGSCIQTDDDVEALSKVEGVTAVLNFQSGTEAENWGINVKSINDSCQRNNILIINYPIRDGDSYDMRKKLPFCVGLLLRLLRKNLRVFVTCTSGFDRSPACVIAYLHWMTDVSLHAAYTWVTGMHTCRPDRPAIAWATWDLIAMVERGEHNGPPTHAVTFVWNGHEGEDVNLVGDFTVNWKEPLKAKHRGGSRHEVEVKLPQGKYYYKFIVNGQWKHSTSSPAERDESGNVNNIIIIGETASVRPSVQHQQKDANVVKVMERPLNEKERFMLAKAARCIAFSICPLRLAPK* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3704 382 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 1 382 IPR030066 GO:0005983
Psa3g3704 382 CDD E_set_AMPKbeta_like_N 249 328 - -
Psa3g3704 382 SUPERFAMILY E set domains 246 329 IPR014756 -
Psa3g3704 382 Pfam Dual specificity phosphatase, catalytic domain 103 212 IPR000340 GO:0008138|GO:0016311
Psa3g3704 382 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 72 215 IPR029021 -
Psa3g3704 382 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 1 382 - -
Psa3g3704 382 Pfam Glycogen recognition site of AMP-activated protein kinase 249 330 IPR032640 -
Psa3g3704 382 Gene3D Protein tyrosine phosphatase superfamily 75 343 IPR029021 -
Psa3g3704 382 ProSiteProfiles Dual specificity protein phosphatase domain profile. 82 241 IPR020422 GO:0006470|GO:0008138
Psa3g3704 382 CDD DSP_laforin-like 81 227 IPR045204 GO:0019203|GO:0046838
Psa3g3704 382 Gene3D Immunoglobulins 236 332 IPR013783 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3704 2 382 Protein tyrosine phosphatase (PTP) family AT3G01510 68.241 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3704 - - gmx:100814503 732.635