Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3687 ATGATTAATTGTGTAGATTCTGAAGGTGTTCCAAATTTTCGATATGTTACTCAGATGGTTAATCTTGAACGGTATAAGCCTAAAAAGTATAGTCCTCTTAAAGGCAATGTTGGGTGTGAATGTGTTGGTAATTGTTCTGATTCTGATCAATGTTCTTGTGCTATGAAGAATAGAGGAAAATTTCTGTTTAATAGGAATGGAATTGTTGAGGAAACAAAAAAGGACATGATTTATGAGTGTGGTCATTTTTGTGAGATAATTGAAGATGAGCAAGCTGTGAAAATGATCGACAATGACGAGTATCTATTTAACATTGGTAGCACAAATCACAAGGATGGCGTGTTTACAATTGATGCTTCTAAGTATGGATTCCACACATCATGCTATTTGCAGCTGAGGACATTCCACAAAAGACAGAGCTGA 423 0.3546 MINCVDSEGVPNFRYVTQMVNLERYKPKKYSPLKGNVGCECVGNCSDSDQCSCAMKNRGKFLFNRNGIVEETKKDMIYECGHFCEIIEDEQAVKMIDNDEYLFNIGSTNHKDGVFTIDASKYGFHTSCYLQLRTFHKRQS* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3687 140 SUPERFAMILY SET domain 2 123 IPR046341 -
Psa3g3687 140 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 2 85 - -
Psa3g3687 140 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 2 85 - -
Psa3g3687 140 Gene3D SET domain 1 86 IPR046341 -
Psa3g3687 140 Pfam Pre-SET motif 1 85 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Psa3g3687 140 SMART preset_2 2 85 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3687 Psa-Chr3 316265248 316265895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3687 1 84 Su(var)3-9 homologs AT1G73100 33.721 6.41e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3687 - K11420 adu:107484449 85.5001