LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa3g3663	ATGGACAACAATTATTCCATGTTGTTTCCTTGTCCTCCATCTTCAAGCTACACAATTCCGACTACTGGTTTGATGAACAATAGTCAAAGCTCTAATGCATTTCTTGATTTGAAGCCTAGTAACAATAATGATGGTGAAGATGTCAAAGGAGATGAAGGAAACGTTAAAAAGAAAGGAGAGAAAAAAGCTAAGAAGCCTAAATATGCTTTTCAAACTAGGAGTCAAGTTGATATTCTTGATGATGGTTATAGATGGAGGAAATATGGACAAAAAGCTGTTAAAAACAACAAATTTCCCAGGAGCTACTATAGGTGCACACATCAAGGGTGCAATGTAAAGAAACAAGTGCAACGTTTAACCAAAGACGAGGGAGTAGTGGTGACAACTTATGAAGGAGTTCATACTCACCCTATTGAGAAAACAACTGATAACTTTGAGCATATCTTGAGTCAGATGCAAATATACACTCCCTTTTGA	477	0.3669	MDNNYSMLFPCPPSSSYTIPTTGLMNNSQSSNAFLDLKPSNNNDGEDVKGDEGNVKKKGEKKAKKPKYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF*	159

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa3g3663	158	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	17	154	IPR044810	GO:0003700
	Psa3g3663	158	SUPERFAMILY	WRKY DNA-binding domain	71	138	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Psa3g3663	158	Pfam	WRKY DNA -binding domain	80	137	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Psa3g3663	158	ProSiteProfiles	WRKY domain profile.	74	139	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Psa3g3663	158	MobiDBLite	consensus disorder prediction	42	59	-	-
	Psa3g3663	158	MobiDBLite	consensus disorder prediction	37	68	-	-
	Psa3g3663	158	PANTHER	WRKY TRANSCRIPTION FACTOR 75-RELATED	17	154	-	-
	Psa3g3663	158	Gene3D	WRKY domain	63	138	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Psa3g3663	158	SMART	WRKY_cls	79	138	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa3g3663	Psa-Chr3	313137784	313139683	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa3g3663	67	158	WRKY Transcription Factor Family	AT5G13080	86.957	9.93e-59	177

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Psa3g3663		WRKY	1.2e-26	CL0274