Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3663 ATGGACAACAATTATTCCATGTTGTTTCCTTGTCCTCCATCTTCAAGCTACACAATTCCGACTACTGGTTTGATGAACAATAGTCAAAGCTCTAATGCATTTCTTGATTTGAAGCCTAGTAACAATAATGATGGTGAAGATGTCAAAGGAGATGAAGGAAACGTTAAAAAGAAAGGAGAGAAAAAAGCTAAGAAGCCTAAATATGCTTTTCAAACTAGGAGTCAAGTTGATATTCTTGATGATGGTTATAGATGGAGGAAATATGGACAAAAAGCTGTTAAAAACAACAAATTTCCCAGGAGCTACTATAGGTGCACACATCAAGGGTGCAATGTAAAGAAACAAGTGCAACGTTTAACCAAAGACGAGGGAGTAGTGGTGACAACTTATGAAGGAGTTCATACTCACCCTATTGAGAAAACAACTGATAACTTTGAGCATATCTTGAGTCAGATGCAAATATACACTCCCTTTTGA 477 0.3669 MDNNYSMLFPCPPSSSYTIPTTGLMNNSQSSNAFLDLKPSNNNDGEDVKGDEGNVKKKGEKKAKKPKYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3663 158 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 17 154 IPR044810 GO:0003700
Psa3g3663 158 SUPERFAMILY WRKY DNA-binding domain 71 138 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa3g3663 158 Pfam WRKY DNA -binding domain 80 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g3663 158 ProSiteProfiles WRKY domain profile. 74 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g3663 158 MobiDBLite consensus disorder prediction 42 59 - -
Psa3g3663 158 MobiDBLite consensus disorder prediction 37 68 - -
Psa3g3663 158 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 17 154 - -
Psa3g3663 158 Gene3D WRKY domain 63 138 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa3g3663 158 SMART WRKY_cls 79 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3663 Psa-Chr3 313137784 313139683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3663 67 158 WRKY Transcription Factor Family AT5G13080 86.957 9.93e-59 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa3g3663 WRKY 1.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3663 - - pvu:PHAVU_001G088200g 234.572