Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3633 ATGGATACCATATTTCCAACGCTTCAGTACATGAAGTTTCTAACCCTTTGGCTGTTTTTTTCAATGTACTTTTGCGCACTCATAAACAACTCTTCTTTGGTTGTTGTTTCTTCCATGACACTTTGGTCTGCTTCATCCACTTTACAAAGCAGAGAAGTAAGTGCTTTGTTGAAGTGGAAATCAAGTCTTGACAAACAAAGTCAATCTCTCCTATCTTCATGGAGTGGTAATAATTCATGCAACTGGCTTGGAGTTTCGTGCACTGAAGACTCCATGTCTGTCTCTGAGATAAGGCTTACAACTATGGGATTAAAAGGTACACTTGAAAGTCTTAACTTCTCATCACTTCCAAATATTCTCACTCTTGATCTTAGTGTCAACTTGTTCACTGGAAGTATTCCTCCCCATATTCAGATGTTGTCTAAACTTTCCTATCTTGATCTTGGCGACAATAAACTTTCAGGAACAATTCCATATGAAATAACACACTTGACTAGTCTTCATACTTTATATCTGAATAATAATGTTTTCAATAGTTCCATTCCTAAAAATATAGGTGCACTCAAGAATATGAGGAATTTGTTTCTTAATAACGATAATCTTTTTGGATGTATTCCACGAGAAATTGGGAAGTTGCTGAACCTAGAATATCTAGATCTTCATGAAAACAATCTTTCCGGATCTATTCCTCAAGAAATTGGAATGTTAGTGAACCTAAAACTTCTATATCTTGTTGGTAATAATCTTTCTGGAACTATTCCTCGAGAAATTGGAAAGTTAGTGAACATAACTATAGTTTATCTTCAAGATAATAATCTTTCTGGATCTATTCCTAGCGAAATTGGAACGATGAGATCTATGATAGAACTTGATTTGTCAAATAATTCTCTCTCTGGGAAAATCCCACCTACAGTTGGAAATTTGAGCAATTTACAATCTATTGACTTTCATAAAAACCATTTCAGCGGGTCAATTCCGACAGAATTGAATAAGGTTTCTAATTTGGAATCAATCTTTCTATATGACAATAATTTCATTGGTCAGTTGCCTCGTAACATTTGCCTCGGTGGAAACTTGATATCCATTATTGCTTTTAATAACCATTTTAGAGGGCAAGTTCTCAAGAGTTTGAATAATTGTTCTAGCCTTAAGAGACTTTGGCTTCAACAAAACCATTTTGATGGAAACATAGCTGATGATTTTGGTGTATACCCAAATTTGAAGTTCTTGGGATTGGATGACAATGATTTTTATGGTCACCTTTCGTCCAACTGGGTTAAGTTTCATAATTTAACATATCTTCACATTTCAAAAAATAATATAACAGGCTCAATACCACCTGAACTCGGTGAAGCATCCAAATTATATTCAATTGACTTATCTTCCAATCATCTCACTGGAAATATTCCAAAAGAGTTAGGAAACTTAACCATGTTGGGCAGACTCGTTTTAAACAACAACCATCTTTCTGGTAATGTTCATGTAAAAATAGCATCATTAAAGGAACTTGAAATCTTAGACATTGCAACAAATAATCTAAGCGGTTTCATCACAAAACAGCTTGTGAGTTTGTCCAAATTAATAAGCTTGAATTTGAGCCATAACAAATTTAGAGGGAATATTCCTGATGAGTTTGGTGAATTTCATGCCCTTCATAGTCTTGATCTAAGTGGAAATATTTTGGATGGAACCATACCTCCAATGCTTGGAAAATTGACACTCTTAGAAACATTGAATATTTCGCATAACAACCTTTCTGGAGTTATCCCTTCTTCCTTTGATCAGATGATTAGTTTGTCATTTGTTGATATATCTTATAACCAATTGAAAGGTCCACTTCCAGATATGCGAGCATTCAATATCGCACCAATTGAAGTGTTGAGAAATAATACAGGCCTGTGCGGTAATGTTTCAGGCTTGATGCCTTGCTTAAATTCAAGCAGTGGATCTCACAATCATAAGACTGAGAATTTGATCTTATTGATAGGCTTACCTCTAGCACCGGGAACTCTAATGCTGGCATTCGTTTGTTTCAAGTTTTTAAAGCATTTATATCAAATGTTAAACACAAGAAACAATCAGGATGGCGGAATTATCGTTCCTCCGAATAATGTATTCACAATATGGAGTTTTGATGGGAAACTGGTGTATGAAAACATTATTGAAGCAACAGAAGAGTTTGATGACAAATATCTCATAGGAGTAGGAACACATGGAAGTGTCTACAAAGCTGAGTTGCACACAGGTCAAACAGTTGCTGTTAAAAAAATCCATAAAGCAACAAATGGAGAAAATTCTGACATAAGATGTTTCACAATTGAGATTCAAGCTCTGACAGAAATTCGACATCGTAACATTGTGAAGCTATATGGATTTTGTTCACATTCGCGCGTGTCGTTTTTGGTTTATGAGTTCATGGAGAAAGGTAGTTTGGAAAAGATTTTGAAAGCTGATGAACAAGCAACTGAATTTGATTGGAATAAGAGGGTGAATGTGATTAAAGATGTAGCAAATGCTTTATACTATATGCACCATGATTGTTTCCCTCCTATTGTTCATAGAGATATATCAAGCAAGAATATTCTTCTGGATTTAGAATATGTGGCTCGTGTTTCGGACTTTGGAACAGCTAAGCTTCTTAATCCCAATTCAGCCAACTGGACCTCATTTGCAGGCACATTTGGATATTCTGCTCCAGAACTTGCATACACAATGGAAGTGAATGAGAAATGTGATGTGTATAGTTTTGGAGTATTAGCATTGGAAATAATTTATGGAAAGCACCCTGGAGATATCATATCTAATTACGGACAACGGAATACTATGTCATTGATGGACATATTGGACCAACGTCTCCCTCGTCCAACGAATACTAATGCTAAGCAGTTATTATCCATTACAAAGACGTTATTTTCTTGCTTGGATGAAAGTCCACGATCTCGTCCAACCATGGAGCAGGTTTCCATGGAGATTTCAATATCATAA 2985 0.3551 MDTIFPTLQYMKFLTLWLFFSMYFCALINNSSLVVVSSMTLWSASSTLQSREVSALLKWKSSLDKQSQSLLSSWSGNNSCNWLGVSCTEDSMSVSEIRLTTMGLKGTLESLNFSSLPNILTLDLSVNLFTGSIPPHIQMLSKLSYLDLGDNKLSGTIPYEITHLTSLHTLYLNNNVFNSSIPKNIGALKNMRNLFLNNDNLFGCIPREIGKLLNLEYLDLHENNLSGSIPQEIGMLVNLKLLYLVGNNLSGTIPREIGKLVNITIVYLQDNNLSGSIPSEIGTMRSMIELDLSNNSLSGKIPPTVGNLSNLQSIDFHKNHFSGSIPTELNKVSNLESIFLYDNNFIGQLPRNICLGGNLISIIAFNNHFRGQVLKSLNNCSSLKRLWLQQNHFDGNIADDFGVYPNLKFLGLDDNDFYGHLSSNWVKFHNLTYLHISKNNITGSIPPELGEASKLYSIDLSSNHLTGNIPKELGNLTMLGRLVLNNNHLSGNVHVKIASLKELEILDIATNNLSGFITKQLVSLSKLISLNLSHNKFRGNIPDEFGEFHALHSLDLSGNILDGTIPPMLGKLTLLETLNISHNNLSGVIPSSFDQMISLSFVDISYNQLKGPLPDMRAFNIAPIEVLRNNTGLCGNVSGLMPCLNSSSGSHNHKTENLILLIGLPLAPGTLMLAFVCFKFLKHLYQMLNTRNNQDGGIIVPPNNVFTIWSFDGKLVYENIIEATEEFDDKYLIGVGTHGSVYKAELHTGQTVAVKKIHKATNGENSDIRCFTIEIQALTEIRHRNIVKLYGFCSHSRVSFLVYEFMEKGSLEKILKADEQATEFDWNKRVNVIKDVANALYYMHHDCFPPIVHRDISSKNILLDLEYVARVSDFGTAKLLNPNSANWTSFAGTFGYSAPELAYTMEVNEKCDVYSFGVLALEIIYGKHPGDIISNYGQRNTMSLMDILDQRLPRPTNTNAKQLLSITKTLFSCLDESPRSRPTMEQVSMEISIS* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3633 994 Gene3D Ribonuclease Inhibitor 331 645 IPR032675 -
Psa3g3633 994 SMART LRR_typ_2 332 356 IPR003591 -
Psa3g3633 994 SMART LRR_typ_2 212 235 IPR003591 -
Psa3g3633 994 SMART LRR_typ_2 164 188 IPR003591 -
Psa3g3633 994 SMART LRR_typ_2 140 163 IPR003591 -
Psa3g3633 994 SMART LRR_typ_2 524 548 IPR003591 -
Psa3g3633 994 SMART LRR_typ_2 236 260 IPR003591 -
Psa3g3633 994 SMART LRR_typ_2 284 308 IPR003591 -
Psa3g3633 994 SMART LRR_typ_2 428 452 IPR003591 -
Psa3g3633 994 SMART LRR_typ_2 572 595 IPR003591 -
Psa3g3633 994 ProSitePatterns Protein kinases ATP-binding region signature. 733 756 IPR017441 GO:0005524
Psa3g3633 994 ProSiteProfiles Protein kinase domain profile. 727 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3633 994 SUPERFAMILY Protein kinase-like (PK-like) 706 988 IPR011009 -
Psa3g3633 994 Gene3D Transferase(Phosphotransferase) domain 1 806 993 - -
Psa3g3633 994 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 10 193 - -
Psa3g3633 994 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 194 993 - -
Psa3g3633 994 SUPERFAMILY RNI-like 289 612 - -
Psa3g3633 994 ProSitePatterns Tyrosine protein kinases specific active-site signature. 851 863 IPR008266 GO:0004672|GO:0006468
Psa3g3633 994 SUPERFAMILY L domain-like 78 392 - -
Psa3g3633 994 Gene3D Phosphorylase Kinase; domain 1 703 805 - -
Psa3g3633 994 ProSiteProfiles Leucine-rich repeat profile. 214 236 IPR001611 GO:0005515
Psa3g3633 994 Pfam Leucine rich repeat 551 609 IPR001611 GO:0005515
Psa3g3633 994 Pfam Protein kinase domain 729 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3633 994 Gene3D Ribonuclease Inhibitor 49 330 IPR032675 -
Psa3g3633 994 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 194 993 - -
Psa3g3633 994 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 10 193 - -
Psa3g3633 994 Pfam Leucine Rich Repeat 289 308 IPR001611 GO:0005515
Psa3g3633 994 Pfam Leucine rich repeat N-terminal domain 51 87 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3633 Psa-Chr3 308951966 308955324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3633 33 899 Receptor kinase-like Gene Family AT4G08850 43.609 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa3g3633 Pkinase 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3633 - - mtr:MTR_7g039330 1084.32