Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3593 ATGCAACTTCATAACCTTTGCATTGTTTTACCACAAAACTCGGGTGAAATAATGAAACAACAACCTCAAAATGGTTTCCAACAACAACAACCTAAGTCTAGAAACCCTTCAAGTGCTTGTGGTGGTGGAGGACAACATGTTCTTGATTTGCTTCATGATTCTTTGAGCAAGCTATGTAGTTCAAGATGGTGGGGAGGTGCAAAAAGAATTTGCAGACATAAGGGGGTGCAAAAAGCAAAAAAGAAAAACTCTTCAAGAGATTCTTCTACTACTATGTTTCATGACATGGATGGTGTTCAATTTGCTGTGAAGATTGGAAGAGACAATCCAAGGATTTTCAGCTATGCGGAACTTTTCATAGGTTCTAATGGTTTCAATGAAGAACAGGTTCTAGGAAGTGGAGGCTTTGGAAAAGTGTACAAAGCGCTTTTGCCAAGTGATGGAACTTTGGTTGCTGTGAAATGCTGTTTATCAGAGAAAGGTAAACAGTTTGACAAGAGTTTCTTAGCCGAGTTATCGGCCGTAGCCGATCTTCGTCACAAGAATCTCGTCCGGTTGAGAGGCTGGTGTGTTCATGAGGATCAACTTCATCTTGTTTACGATTACATGCCGAATCGAAGCCTTGATCGCGTGCTTTTCCGACGGAAGGAGAATTCGAAAGGCGAGATTCTTGGTTGGGGACAGAGATGTAGAATTGTGAAAGGCTTGGCTGCTGCATTGTATTATCTACATGAACAGTTAGAGACTCAAATCATTCATAGAGATGTGAAAACTAGTAATGTTATGCTTGATTCGCATTATAATGCTAAGTTAGGCGATTTCGGTATGGCGAGGTGGTTGGAACATGAACTTGAGTATGAGTTTAAGTACAATTACAACAGCAGCAGCAGCAGCAATAAGAAAACTTCGAGTAGAATCGATCATTTCAAGTTGGGCGAAACATCGAGAATCGGTGGAACAATTGGTTATCTTCCACCAGAAAGCTTGCAAAAACCGAGCAACGGTACGTCGAAATGTGATGTTTTTAGCTTTGGGATTGTTGTGCTTGAAATTGTGTCTGGTAGAAGAGCAATAGATCTAGCATATTCTGATGAGAAAATCATTCTGCTTGATTGGATTCGAAGGCTTTGCGACGAAGGGAAGCTTCTAGAAGCAGCTGATTCTAGACTGCAAAAAGATTCATCATCATCATCATCATTCAATTTTTCTGAGATGAAGCATTTGATTCATATAGGTTTACTTTGCACGCTTCATGATCCGAATTTGAGGCCTAATATGAAATGGGTTGTGGAAGCACTTTCTGATTTAAGTTTCAAACTTCCTTCACTTCCTTCATTTCTGTCACACCCTCTTTATATCTCTTTGTCTTCACCTTCTGAGACTACTAGTCCTAGTAGCACGAGCGGCACGATCTCGGCCTCGGCCGCGGAAAACGTTAGCTTGATCACAAATTATAATAGTTCGACAAACTATTTCACAGCTGCAGGTGAAACAGTTTATGTGACAGCCGAAAACAGAAACAGCGGAATCATTTCTTCGAAGAGCATGAATCGGAATCATCACAGGCCGAACTTTCCGGTGGTTGAAACTCCGAGAGAAATTTCGTACAAAGAGATTGTTTGTGCTACAAGTAACTTCTCAGAGTCAAGAAGGGTAGCTGAACTAGACTTTGGAACTGCGTATCATGGAATCCTCGACAACGATTGTCATGTTTTGGTGAAAAGGTTGGGAATGAAGACGTGTCCTGCGTTGCGCATTCGATTCTCGGACGAACTCAGGAATTTGGGAAAGCTTCGACATCGGAATTTAGTGCAGCTTCGCGGATGGTGTACCGAACAAGGGGAGATGCTCGTGGTTTATGATTACTCAGCTAGTAGAATTCTCAGTCAACAACTTCTCCAAATTCATAACAAAGGCGAGAACGATTCGGTACTCGAATGGAATCATAGGTACAACATAGTTAAATCGCTTGCTTCTGCTGTTCATTACCTACACGAAGAATGGGACGAACAAGTGATTCACAGAAACATTACCTCTTCCGCTGTGATTCTCGAACAAGATATGAATCCAAGGCTTAGCAGTTTCGCTCTAGCTGAATTCCTATCAAGGAACGAGCACGGAAACCATCAAGTAGTCAACGACGGAAGCACATCCGTTCGAGGGATTTTCGGTTACATGTCACCAGAATACGTCGAAACGGGCGAAGCAACCACGGCTGCGGATGTTTATAGTTTCGGCATGGTGGTGCTTGAGGTTGTAAGTGGACAAATGGCAGTGGATTTTCGGTACAAAGAGGTTCTTTTGGTGAAGAAAGTTCATGAGTTTGTGATGAAGAAAAGGCCATTGAAGGAACTAGCTGATGTAAGACTCAATGGAGAGTATAATGAGAAAGAGTTGATGAGGTTGGTGAGATTAGGAATTGTATGTACAAGTTCTGATCCTGAGTTGAGGCCAAGCATGAGACAAATTGTGAGTATTCTTGATGGAAATGATAAATTGTTGAACATGAAAAAGAGGGAAAGTAGGGAAGATTGGAGGGAAAGAAATGGTAGCTCTTTGTCAATGGTTAGGAGGATTCAAGCTCTTGGGATACAATGA 2598 0.418 MQLHNLCIVLPQNSGEIMKQQPQNGFQQQQPKSRNPSSACGGGGQHVLDLLHDSLSKLCSSRWWGGAKRICRHKGVQKAKKKNSSRDSSTTMFHDMDGVQFAVKIGRDNPRIFSYAELFIGSNGFNEEQVLGSGGFGKVYKALLPSDGTLVAVKCCLSEKGKQFDKSFLAELSAVADLRHKNLVRLRGWCVHEDQLHLVYDYMPNRSLDRVLFRRKENSKGEILGWGQRCRIVKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSHYNAKLGDFGMARWLEHELEYEFKYNYNSSSSSNKKTSSRIDHFKLGETSRIGGTIGYLPPESLQKPSNGTSKCDVFSFGIVVLEIVSGRRAIDLAYSDEKIILLDWIRRLCDEGKLLEAADSRLQKDSSSSSSFNFSEMKHLIHIGLLCTLHDPNLRPNMKWVVEALSDLSFKLPSLPSFLSHPLYISLSSPSETTSPSSTSGTISASAAENVSLITNYNSSTNYFTAAGETVYVTAENRNSGIISSKSMNRNHHRPNFPVVETPREISYKEIVCATSNFSESRRVAELDFGTAYHGILDNDCHVLVKRLGMKTCPALRIRFSDELRNLGKLRHRNLVQLRGWCTEQGEMLVVYDYSASRILSQQLLQIHNKGENDSVLEWNHRYNIVKSLASAVHYLHEEWDEQVIHRNITSSAVILEQDMNPRLSSFALAEFLSRNEHGNHQVVNDGSTSVRGIFGYMSPEYVETGEATTAADVYSFGMVVLEVVSGQMAVDFRYKEVLLVKKVHEFVMKKRPLKELADVRLNGEYNEKELMRLVRLGIVCTSSDPELRPSMRQIVSILDGNDKLLNMKKRESREDWRERNGSSLSMVRRIQALGIQ* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3593 865 Gene3D Phosphorylase Kinase; domain 1 98 202 - -
Psa3g3593 865 Gene3D Transferase(Phosphotransferase) domain 1 629 853 - -
Psa3g3593 865 SMART serkin_6 125 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3593 865 MobiDBLite consensus disorder prediction 19 41 - -
Psa3g3593 865 Pfam Protein kinase domain 125 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3593 865 Gene3D Transferase(Phosphotransferase) domain 1 203 439 - -
Psa3g3593 865 PANTHER - 1 864 - -
Psa3g3593 865 Pfam Protein tyrosine and serine/threonine kinase 551 827 IPR001245 GO:0004672|GO:0006468
Psa3g3593 865 SUPERFAMILY Protein kinase-like (PK-like) 110 469 IPR011009 -
Psa3g3593 865 MobiDBLite consensus disorder prediction 19 40 - -
Psa3g3593 865 CDD STKc_IRAK 557 829 - -
Psa3g3593 865 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Psa3g3593 865 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Psa3g3593 865 SUPERFAMILY Protein kinase-like (PK-like) 521 827 IPR011009 -
Psa3g3593 865 ProSiteProfiles Protein kinase domain profile. 125 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3593 865 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 1 864 - -
Psa3g3593 865 ProSiteProfiles Protein kinase domain profile. 546 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3593 865 Gene3D Phosphorylase Kinase; domain 1 507 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3593 Psa-Chr3 303365380 303368519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3593 531 835 Receptor kinase-like Gene Family AT3G59740 34.091 1.55e-48 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa3g3593 Pkinase 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3593 - - gmx:100796108 1235.32