Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3581 ATGTCCTTCAATCAATCAAAGTCCGATAAGAGCGACACTGCGCACCGACGCTCCGCCCGATCCGCCAGCTTTAATCAGCACCGAGGTAACTCCGGCGGTTCTTACGTTAAGGCCGGCACCGGCGCGGCCGCGCCTTCACCCGCACTCTCGTCTTCTCGGAGTTTTAATAAGAAGTCTAATAATCATGCACAAGGTGGGCCGCCTATGGTAAAGCCTACCCCGGCAAATGCGAATTCAGCTGAGTTAAATTATGCTTCTGTAGTCCGAGCAACACCAAATGGTTCCCATGTACAACCGCAATTTCATGGAGGGTCTGATGCATCAGTTACAAGTGCAACTACCAAGCCATCTGAAACATCAGCTGCCCAGAGGAGCACCAGGGTTGTTCCTAAAGCTCCTATTTCTCAACCTCCTTCCGTGATTTCCGATTCAGCAGCTCCTACGACCCCTGCTAAGGGTGATGCATCCAAAGCATTCCCTTTCCAATTTGGATCTATTAGTCCTGGCATTATGAATGTGATGACTATTCCTGCTCGCACAAGCTCGGCCCCTCCTAATATAGATGAGCAAAAGCGTGATCAGGCTCGTCATGATTCTTCAAAACCTGCGCCTTCTGTGCCGACACCTCCTGTTCCAAAGCAGCTTCCTGTTCCAAAGCAGCTGCCAGCTAATAAGGATACAGGTGTCGTCGACCAATCTAAGGGTGGGGAGATTCATACTGGTACAAGGGCAAAAAAGGATACTCAATCGTCACATTTACCTCCACCAAGCTTGATGCACAAGCCTTCTGTTATTCCTATAACTGGGATGTCAATGGCAATGCCATATCACGAGTCACATGCACCTGTGCACTTTGGTGTTCCTAATCCACAGATTCAACCTCGAAGTATGTCAACATCTCTTCAGATGCCTTTACCAATTGGAAATGCTGCGCAAATGCAACACCAAATGCAACACCAAGTATTCGTTCCAAGTCTTCAACCCCATTCTGTCCATCCTCAAGGAATCATGCATCAAGGCCAAAATATGGGTTTCACTCCTCAAATTGGTCATCAAATGGCCCATCAGTTAGGCAACATTGGTATGGGCATCAACCCACAATATTCTCCTCAGCAAGGAGGAAAATATGCTGCTCCTCGTAAAACTACTCCAGTGAAAATAACTCACCCTGATACCCACGAAGAGCTTAGACTTGATAAAAGGGCCAATGCATATTCAGATGGTGGGTCATCTGGTGCTAGGCCTCATTCTGGCATCCCTTCTCAATCTCCGCCTGTCCAGTCATTTCCTGCTTCGCATCCTATCAGTTACTATCAACCCAATTCTCCCTTTTATCAAACTCCTAGTTCTCTTCCATTATCAAATAGCCAGATAACCCCCACTACCCAGCCCCCAAGATTAAATTATACAGTGAATCGTGGTCCGCAAAATGTTGGTTTCGTGAATTCAGTGTCTCATAATTCCCTGCCTGTTAATAAAACCGTCGCTTCTATTTCTGGCATTGTTGAACCACCTAATCGGGAATTTTCCCGTGATGTGCCGAATGCAATCTCATCAACTGTGTCAGGAGCCTCTTATGTGTCTATAAAGCCAAGTGGGTCTGGCGTTGTGATCTCATCATTTTCCGATTCAATTTCTGGTGCTAAAAAAGATGGATCTCCTAATTCCGTGGTAACATCTAGTGATGCCAGCGCTTCTTTGCCACCAAAGGAGTCTGGTACTTGTTCTGAAATCTCTTCCCAACAATCTACTGTTGCATCTTCTGAGAAGCTTACATCAGCGTCCTTGTTGCCTTCTTCATCTGTCTTGAGTAAGAATATGGTTTCAGATGTATCCAAAAACGAGGGCAAAAACAAGGAATCTCTTAGTAGGTCAAATTCTTTGAAGGATAATCAGAAGAAAGGACAATTGCAGCATCAGGTGGCTGTACAATCTTCTGCTGTGGCCAATGAACCTTCTCTAGCTGTTGATGGTGGTACCTATGATTGTGTAGCTTCTGAAGTTGTAGGAACTAAAACACATTCTGCAGCAATTGCCTGTGAAGATTTATCAGCAGCAGCTTCAGGCACATTATCAGCTGCCAGTGAGAGCCTGCCTTCTGTGTCACTTGAGGAAAAGACCATTTGTTCTAGACAAGTCTCTGCTTGCTGTGTTTCAGTTGGAGGACCTGTTACTCAAGCCGTTAGTTTGAACAATCATAACAGTGCTAAGGTAGATGAATTATCCCAAGAGGATAAACAATTAAGACAGACCGTTTCAACTCTTCAGGGATGTAAAAATGTTCGTGACGGCGGGACAGAATTTAATCAACTCAAACAGGAGACTGGACAGCAAGGGCAGGGTGGATCTGCAAGTTACATCACAGAATGTGACAGGATGGCCGATAATTTAAACACGTCTACCTCTACTACATTGGATTCTAAAGAAACAGCTTCAAAACATTGCAAGGATAGTTCAGAGGATGCTATTGTTGGCAGTGGCTCGGTGTCTCTTCCAGGTGCACCAAGTACTATGGACCGACCAAGTTTAGAGCCAAGTAAAGTGAAAGCTTCATCAAAAGGAAAAAAGAAACGAAAAGAGGTTCTTCTGAAAGCAGATGCTGCTGGGATGACATTTGATCTTTATAACGCATATAAGCGACCTGAGGAAAAGGAAGAGGCTGTTGTCAGTTCGGAGAATACTGGATGTGTTTCTTCTGGAAATTTGAAGCAGTTGCCTGTGGATGCTTCTCAGCCAAATGTAGTTGCAAATGAACAATGCATGCAGAGTAAGGCTGAACTTGAGGACTGGGAGGATGTCGCTGACATGTCCACACCGAAACTAGAAGTATCAAATAAAACTCAACTGGTTAGCGACGACAGTGCAGTTACTGAAAAGAAATACTCTCGAGATTTTCTTTTGAAATTTGCAGAGCATTGCACTGATCTTCCTGAAGGGTTTGAAATCTCGGCAGACATGGAGGCTTTGATGGATCGTCGTGGGAGTGGTGTTATTGAGGACGATAAATGGAGTAAAGCGTATGGTGTTATTGGTAGTGGAGGTAGTACAGGACTTAGACCTAGCCAAGTAGGCAATTTTGGCGTTTTAAGGAATCTACGCCCACAGGGAATGCAATATGGGGGAGGGATTCTCTCTGGGCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAATAGCGCTGATGGTGAAAGGTGGCAGCGTAGTGTTAGCTTCCAGCAGAGGGGTTTAATTCCATCTCCTTCTCAATCTCCTATGCAGATGATGCACAAAGCTGAGAAGAAGTATGAGGTTGGTAAAGTGACAGACGAGGAACAGGCGAAGCAGAGGCAATTGAAGGGTATATTGAACAAGTTAACTCCACAGAATTTTGAGAAGCTTTTTGAGCAGGTAAAAGCAGTTAATATTGACAACGCAGTCACTCTCACTGGTGTCATCTCACAGATCTTTGAGAAGGCCTTGATGGAACCTACCTTCTGTGAAATGTATGCCAATTTCTGTTTTCATCTGGCAGCTGCATTGCCTGATCTCAGTCAAGACAATGAAAAGATAACATTTAAGAGATTACTGTTAAACAAGTGCCAAGAAGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTGATAAAGCTGATGAGGGTGAGGTGAAACAGTCTGATGAGGAAAGAGAAGCAAAACGATCCAAGGCTAGAAGACGAATGTTGGGTAATATCAGGTTAATTGGAGAACTATATAAGAAGAGAATGCTGACAGAGAGGATAATGCACGAGTGCATCAAAAAGTTACTCGGTCAGTGTCAGAATCCTGATGAAGAAGATATTGAAGCTTTATGCAAACTGATGAGTACTATTGGGGAGATGATTGATCACCCCAAAGCCAAGGAACATATGGATGATACCATTGATTTAAGAAGGAATAGATGGCAACAAAGGAGAAAAGTTGAAGGTCCAAAGAAGATTGAAGAGGTGCACCGAGATGCTACCCAAGAGAGGCAATCCCAAGCTGGTAGGCTGGGTCGTGGTATGGGTATTAGTGCAGCAAGAAGGGTCCCTATGGATTATGGTTCAAGAGGTTCATCTATATTATCCCCTCCTAATGCTCAGATGGGTGGATTGCCTACTCAAGTTCGTGGTTATGGTTCTCAGGATGTTCGTGGTTATGGTTCTCAGGATGTTCGTGGGTATGAAAAGCAATCTTACGAGGCTAGGACACTGTCTATTCCCTTGCCTCAAAGGACTTTAGCTGACGAGTCAATAAACTTGGGACCCCAAGGTGGTCTGGCTAGAGGAATGTCCATCAGAGGTCCTCCTGCAGTTTCAAGTTCTACGGGTCTTAATGGTTATAGTAATTTATCTGAACAGGCTTCATACAACTCTAGGGAGGACCACCCTCCAAGATATGTTTCGGATAGATTTTCTGGTCCAAATGCTTATGATCAATCAAGTGTTCCAGAGCAGAATATGAATTATAGTAACAGGGACTTGAGAAATGTAAATAATAGAATTCTTGATAAACCTGTTTCAAATCCACCTCCTACCCAAGCACAAGAGACATCGGGCTCCCATAATACCTCTTCAGAAAAGGGTTTGTCAGAAGAGCGACTACAGAACATGTCCATGGCAGCAATTACAGAATACTATAGTGCTAGAGATGTGAGCGAAGTTGTTTTGTGTGTCAAAGATCTGAACTCTCCAAGCTTTCATCCTTCCATGGTTTCTGTCTGGGTCACAGACTCATTTGAGAGAAAGGACACACAGCGAGAACTTTTAGCCAAACTGCTGATCGACCTTGTGAAATTACATGGTGGCACCTTAAGTCAAGCCCAGCTCATTAAAGGGTTTGAATCTGTTCTCAGTACTTTGGAAGATGTGGTTACGGATGCCCCAAAAGCACCGGAGTTTCTTGGCCGCATTTTCGCTAAAGCTATAACAGAGCATGTAGTCTCTTTGAAGGAGATTGGGAGGTTAATACGCGACGGCGGAGAAGAACCAGGACGCCTCATACAAATTGGACTTGCAGCTGATGTTCTTGGAAGCACATTAGAAGTGATACAAATCGAGAAGGGTGATGCCTTTTTGACAGAGATCCAGACAAGCTCCAACTTGCAATTGCAGACTTTCCAGCCACCAGGACCAACCAAATCACGAAAACTAGATAAATTTATTTAG 5172 0.4437 MSFNQSKSDKSDTAHRRSARSASFNQHRGNSGGSYVKAGTGAAAPSPALSSSRSFNKKSNNHAQGGPPMVKPTPANANSAELNYASVVRATPNGSHVQPQFHGGSDASVTSATTKPSETSAAQRSTRVVPKAPISQPPSVISDSAAPTTPAKGDASKAFPFQFGSISPGIMNVMTIPARTSSAPPNIDEQKRDQARHDSSKPAPSVPTPPVPKQLPVPKQLPANKDTGVVDQSKGGEIHTGTRAKKDTQSSHLPPPSLMHKPSVIPITGMSMAMPYHESHAPVHFGVPNPQIQPRSMSTSLQMPLPIGNAAQMQHQMQHQVFVPSLQPHSVHPQGIMHQGQNMGFTPQIGHQMAHQLGNIGMGINPQYSPQQGGKYAAPRKTTPVKITHPDTHEELRLDKRANAYSDGGSSGARPHSGIPSQSPPVQSFPASHPISYYQPNSPFYQTPSSLPLSNSQITPTTQPPRLNYTVNRGPQNVGFVNSVSHNSLPVNKTVASISGIVEPPNREFSRDVPNAISSTVSGASYVSIKPSGSGVVISSFSDSISGAKKDGSPNSVVTSSDASASLPPKESGTCSEISSQQSTVASSEKLTSASLLPSSSVLSKNMVSDVSKNEGKNKESLSRSNSLKDNQKKGQLQHQVAVQSSAVANEPSLAVDGGTYDCVASEVVGTKTHSAAIACEDLSAAASGTLSAASESLPSVSLEEKTICSRQVSACCVSVGGPVTQAVSLNNHNSAKVDELSQEDKQLRQTVSTLQGCKNVRDGGTEFNQLKQETGQQGQGGSASYITECDRMADNLNTSTSTTLDSKETASKHCKDSSEDAIVGSGSVSLPGAPSTMDRPSLEPSKVKASSKGKKKRKEVLLKADAAGMTFDLYNAYKRPEEKEEAVVSSENTGCVSSGNLKQLPVDASQPNVVANEQCMQSKAELEDWEDVADMSTPKLEVSNKTQLVSDDSAVTEKKYSRDFLLKFAEHCTDLPEGFEISADMEALMDRRGSGVIEDDKWSKAYGVIGSGGSTGLRPSQVGNFGVLRNLRPQGMQYGGGILSGPMQSMVNQGGMQRNSADGERWQRSVSFQQRGLIPSPSQSPMQMMHKAEKKYEVGKVTDEEQAKQRQLKGILNKLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCFHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEADKADEGEVKQSDEEREAKRSKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQCQNPDEEDIEALCKLMSTIGEMIDHPKAKEHMDDTIDLRRNRWQQRRKVEGPKKIEEVHRDATQERQSQAGRLGRGMGISAARRVPMDYGSRGSSILSPPNAQMGGLPTQVRGYGSQDVRGYGSQDVRGYEKQSYEARTLSIPLPQRTLADESINLGPQGGLARGMSIRGPPAVSSSTGLNGYSNLSEQASYNSREDHPPRYVSDRFSGPNAYDQSSVPEQNMNYSNRDLRNVNNRILDKPVSNPPPTQAQETSGSHNTSSEKGLSEERLQNMSMAAITEYYSARDVSEVVLCVKDLNSPSFHPSMVSVWVTDSFERKDTQRELLAKLLIDLVKLHGGTLSQAQLIKGFESVLSTLEDVVTDAPKAPEFLGRIFAKAITEHVVSLKEIGRLIRDGGEEPGRLIQIGLAADVLGSTLEVIQIEKGDAFLTEIQTSSNLQLQTFQPPGPTKSRKLDKFI* 1724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3581 1723 MobiDBLite consensus disorder prediction 18 33 - -
Psa3g3581 1723 Pfam MA3 domain 1542 1648 IPR003891 -
Psa3g3581 1723 SUPERFAMILY ARM repeat 1104 1310 IPR016024 -
Psa3g3581 1723 MobiDBLite consensus disorder prediction 1311 1332 - -
Psa3g3581 1723 MobiDBLite consensus disorder prediction 415 429 - -
Psa3g3581 1723 MobiDBLite consensus disorder prediction 97 153 - -
Psa3g3581 1723 SMART if4_15 1110 1335 IPR003890 GO:0003723|GO:0005515
Psa3g3581 1723 MobiDBLite consensus disorder prediction 405 429 - -
Psa3g3581 1723 MobiDBLite consensus disorder prediction 45 63 - -
Psa3g3581 1723 MobiDBLite consensus disorder prediction 1201 1230 - -
Psa3g3581 1723 SMART ma3_7 1536 1650 IPR003891 -
Psa3g3581 1723 Coils Coil 1192 1212 - -
Psa3g3581 1723 MobiDBLite consensus disorder prediction 548 590 - -
Psa3g3581 1723 MobiDBLite consensus disorder prediction 181 259 - -
Psa3g3581 1723 Pfam MIF4G domain 1110 1306 IPR003890 GO:0003723|GO:0005515
Psa3g3581 1723 MobiDBLite consensus disorder prediction 607 638 - -
Psa3g3581 1723 Gene3D - 1101 1320 - -
Psa3g3581 1723 MobiDBLite consensus disorder prediction 97 146 - -
Psa3g3581 1723 MobiDBLite consensus disorder prediction 1508 1532 - -
Psa3g3581 1723 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 124 990 IPR045208 GO:0003743
Psa3g3581 1723 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 1300 1712 IPR045208 GO:0003743
Psa3g3581 1723 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 990 1299 IPR045208 GO:0003743
Psa3g3581 1723 MobiDBLite consensus disorder prediction 203 217 - -
Psa3g3581 1723 MobiDBLite consensus disorder prediction 803 859 - -
Psa3g3581 1723 MobiDBLite consensus disorder prediction 1 78 - -
Psa3g3581 1723 MobiDBLite consensus disorder prediction 1311 1343 - -
Psa3g3581 1723 SUPERFAMILY ARM repeat 1529 1719 IPR016024 -
Psa3g3581 1723 MobiDBLite consensus disorder prediction 612 627 - -
Psa3g3581 1723 Gene3D - 1527 1723 - -
Psa3g3581 1723 ProSiteProfiles MI domain profile. 1535 1659 IPR003891 -
Psa3g3581 1723 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 990 1299 - -
Psa3g3581 1723 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 124 990 - -
Psa3g3581 1723 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 1300 1712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3581 Psa-Chr3 302406484 302414241 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3581 1 1722 Eukaryotic Initiation Factors Gene Family AT3G60240 43.098 0.0 1160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3581 K03260 - gmx:100796636 2181.76