Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3577 ATGGCGGAAGTGGCAGTGTCATTAGTTATTGATCAACTACTTCCATTGTTAAGGGAAGAAGCCAAGCTGTTGAGAGGTATTCACAAAGAGTTTGCAGATATTAAAGATGAGCTTGAAAGTATTCAAGCATTCCTTAAGGATGCTGATAAAAGAGCTTCAACAACTGAAGGAGTCAAAACATGGGTTAAGCAAGTTAGGGAAGCAGCTTTTCGCATTGAAGACATCATTGATGATTATTTGATCCATGTGGGACAGCAGCCTCCTCATCCTGGATGTGTATTTTTACTCCATAAACTCAAAACTATTATCCCGAGCCGCCAAATAGCGTCTGAGATTCAAGACATTAAGTTATCTGTTCGTGGGATCAAGGAAAGAAGCGAAAGATATCGCTTCCAACATTCCTTAGAACAAGAATCGAGTAATTCTCGAGAAAGCCAGAATTCCAAATGGCACGATCCTCGAGTGGCTGCTCTTTACGTTGAGGAAGCTGATGTTGTGGGCTATGAACTACAAAGAGATGGGTTGACTGATTGGTTGGTAAAAGGAAGAGATGAGCGCACCGTAGTTTCTGTAGTTGGAATGGGAGGGCAAGGAAAAACCACTCTTGCCAAGAAAGTTTTCGAAAGCAAGAATGTAATTCGACACTTTGATTGTCGAGTATGGATCACTGTGTCTCAATCATATAGCGTTGAAGGGTTGTTAAGGGACATGTTGCTAAACTTATACAAACAAAAAGGAGAAGATCCTCCTGAGGATATTTTTCAAATGGACCGAGAGTCATTGACGGGTGAGGTGAGAAACTACTTGCAGAAAAAGAGGTATGTTGTCGTGTTTGATGATGTTTGGAGTGAACATTTCTGGGATGATATTGAATTTTCTGTAAGTGATAATAAAAATGGAAGTAGGATATTTATCACAACAAGAAACCTAGATGTTGCGATGTCTTGTAAAAAATCTTCTTTTGTTGAAGTGCTTGAGTTGCAACCCTTAACTCAAGAACAATCTTTGGAGTTGTTCAATAAGAAGACATTCAAATTTGACTATGGTGGGTGTTGTCCAAAGGAGCTGAATGGTATATCTTATGAAATTGTTAGAAAATGCAAGGGATTACCACTAGCAATTGTTGCCGTTGGTGGTGTTTTGTCTGCAAAAGAGAAAAATGTTTTCGAGTGGCAGAAATTTAATGAAAATCTTAGCTTCGAGCTATCGAAAAGTACACATTTAATTGGGATACAAGAAATTTTAGGCTTAAGTTATGATGATTTGCCTTACCATCTCAAGTCATGCTTGTTGTATTTCGGAATATATCCGGAGGATTATGAAGTTAAAACAAAGATTCTGATTCAACAATGGATAGCCGAAGGGTTTGTGAAGGAAGAAAGAGGGAAGACTTTGGAAGAAGTTGCGGAAGGATATATAACAGAGTTGATCCACAGAAGCTTAGTGCAATTATCTTCAGTTAGAATTGATGATAAAGTTAAGGGTTGCCGTGTTCATGATCTAATACGCGATATGGTCCTGAAAAAATTCGAGGACTTAAACTTTTGCAAGCATATTAGTGAAGATGAACAATCATCCTTAAGTGGAACAGTTCGCCGCCTATCAATAACAACCACTTCTGATGATTTCATTGAGCGTACTGAAACATCACATGTTCGATCAATACTTGTTTTTACAAATAAAGAATCAAATGTATACTCCGTGAGGAGATTTCCTACAAAATACAGACGCTTAAAGGTTCTTGATTATAAATTTTCGCGATTGTCGAATGTTCCTAAAGAGTTGGGAAGTATGGTTCACTTGAAGTATTTAAGCTTGGGGTATATAAGAGAAGCTAAAATCCCAAACTCCATTGGCATGCTCAAGAACCTAGAGACCTTGGATCTAAGGGCTGCTAATGTTAATGAGTTGCCAAAAGGGATTAGCAAGCTTCGAAAGCTAAGACACCTTATCGGCTCCGGATTATCTTTGATTCGATTGAAGAACGGTGTTGGAGAGATGACATCCCTACAAACACTATGTTATGTTAATTTAGGTATGGATGGAGCTTTAGAGGTGATTAAAGAGTTAGGAAAGCTGAAGCAGATCAGAGAAATAGGGTTGCTTAATGTTCGTAGAGAAGATTACAGCGTTCTATCTTCCTCGATCGCTGAAATGAAACAGTTGGAAAAATTACATGTTAAACTAAGTTCTACAGCTAGCAATGAGTTCATTGATTTGAATTTGACTTCACCGTCAAGTAAGCTTCGAAAACTTACGCTACGCGGGAGGCTAAAGAAGTTGCCAGAGTGGATTTTAGAGCTTCAAAATCTTGTTGTGTTGAGGTTGAAGCTCTCCTGTTTAACTGAAGATCCAATGAAATCGCTCAACAGTTTGCAACACTTGTTGATCCTGTCTATAGGCGTCGGTGCTTATGGAGGTTTAAATTTGCATTTTCAAGATGGATGGTTTCAGAAACTAAAGGAAATGAATGTTGGATCTTCAAATGAATTGAAAGAGATTATTATCGACAAAGGAGCGATGCCTTCTCTGAAAAAGCTTCAGTTATACGGACTCCCTAGACTGAAGAATATACCGACTGGCATCCAACACTTGGAGAAGCTTGAAGTTCTCCATTTTCGGAGTATGCAAGTTGATTTTTTGCAGCGAAATTCTTCCGAGGATTGGAATTGGATTATGGAACATGTGCCCGTTGTAGAAATTTCTCCGGTTGATGGAAAAGTTATTCGAAATTCAAGGAGTTAG 2745 0.3862 MAEVAVSLVIDQLLPLLREEAKLLRGIHKEFADIKDELESIQAFLKDADKRASTTEGVKTWVKQVREAAFRIEDIIDDYLIHVGQQPPHPGCVFLLHKLKTIIPSRQIASEIQDIKLSVRGIKERSERYRFQHSLEQESSNSRESQNSKWHDPRVAALYVEEADVVGYELQRDGLTDWLVKGRDERTVVSVVGMGGQGKTTLAKKVFESKNVIRHFDCRVWITVSQSYSVEGLLRDMLLNLYKQKGEDPPEDIFQMDRESLTGEVRNYLQKKRYVVVFDDVWSEHFWDDIEFSVSDNKNGSRIFITTRNLDVAMSCKKSSFVEVLELQPLTQEQSLELFNKKTFKFDYGGCCPKELNGISYEIVRKCKGLPLAIVAVGGVLSAKEKNVFEWQKFNENLSFELSKSTHLIGIQEILGLSYDDLPYHLKSCLLYFGIYPEDYEVKTKILIQQWIAEGFVKEERGKTLEEVAEGYITELIHRSLVQLSSVRIDDKVKGCRVHDLIRDMVLKKFEDLNFCKHISEDEQSSLSGTVRRLSITTTSDDFIERTETSHVRSILVFTNKESNVYSVRRFPTKYRRLKVLDYKFSRLSNVPKELGSMVHLKYLSLGYIREAKIPNSIGMLKNLETLDLRAANVNELPKGISKLRKLRHLIGSGLSLIRLKNGVGEMTSLQTLCYVNLGMDGALEVIKELGKLKQIREIGLLNVRREDYSVLSSSIAEMKQLEKLHVKLSSTASNEFIDLNLTSPSSKLRKLTLRGRLKKLPEWILELQNLVVLRLKLSCLTEDPMKSLNSLQHLLILSIGVGAYGGLNLHFQDGWFQKLKEMNVGSSNELKEIIIDKGAMPSLKKLQLYGLPRLKNIPTGIQHLEKLEVLHFRSMQVDFLQRNSSEDWNWIMEHVPVVEISPVDGKVIRNSRS* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3577 914 CDD RX-CC_like 2 124 IPR038005 -
Psa3g3577 914 PRINTS Disease resistance protein signature 188 203 - -
Psa3g3577 914 PRINTS Disease resistance protein signature 268 282 - -
Psa3g3577 914 PRINTS Disease resistance protein signature 367 381 - -
Psa3g3577 914 PRINTS Disease resistance protein signature 619 635 - -
Psa3g3577 914 Pfam NB-ARC domain 173 421 IPR002182 GO:0043531
Psa3g3577 914 Gene3D - 425 509 IPR036388 -
Psa3g3577 914 Gene3D - 150 324 IPR027417 -
Psa3g3577 914 Gene3D - 4 112 - -
Psa3g3577 914 SUPERFAMILY L domain-like 497 882 - -
Psa3g3577 914 Gene3D - 329 423 IPR042197 -
Psa3g3577 914 Pfam Rx N-terminal domain 5 88 IPR041118 -
Psa3g3577 914 PANTHER DISEASE RESISTANCE PROTEIN RP 23 877 IPR044974 GO:0006952
Psa3g3577 914 Gene3D Ribonuclease Inhibitor 544 890 IPR032675 -
Psa3g3577 914 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 433 IPR027417 -
Psa3g3577 914 PANTHER - 23 877 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3577 Psa-Chr3 302183905 302187223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3577 160 421 WRKY Transcription Factor Family AT4G12020 26.038 3.70e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3577 K13457 - gmx:100819372 937.176