Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3573 ATGTCTGCTTTTGCATTAGGGAGATTGGCACAGGACACACATAACCAAGCTGGTATTGCACATACCGATGGCTTAGTGCCATTGCTGAAGCTTCTTGACTCAAAAAATGGGTCTTTGCAGCATAATGCTGCTTTTGCTCTTTATGGCCTTGTAGAGAACGAGGATAATGTGCCTGACTTTATTAGGGTAGGTGGAATTAAGAAACTTCAGGATGGAGAGTTCATTATTCAAGCAACTAAGGATTGTGTTTCTAAGACATTGAAAAGACTAGAAGAGAAGATTCATGGTCGTGTGCTGAACCATTTATTATATCTTATACGGGTTTCAGAAAAGGCATTCCAAAGACGAGTTGCTTTGGCTCTTGCCCATCTTTGTTCTGCATACGACCAGAGAAAAATATTTATTGACCACAACGGACTGAAGTTGCTTATCGGGCTTCTTGGCTCATCATGCCATAAGCAGCAACTTGATGGTGCCGTGGCTTTATGCAAGTTGGCCAACAAAGCTATGTCTCTGTCTCCTATTGATGCTGCTCCTCCATCCCCAACACCTCAGGTCTATTTGGGAGAGCAGTATGTAAATAATGCTACCTTATCAGATGTTACATTTTTAGTTGAAGGTAAATGGTTTTATGCCCACAGAATCTGTTTACTCGCTTCTTCAGACGCATTTCGTGCAATGTTTGATGGTGGTTATAGGAAAAGAATTTGA 711 0.4135 MSAFALGRLAQDTHNQAGIAHTDGLVPLLKLLDSKNGSLQHNAAFALYGLVENEDNVPDFIRVGGIKKLQDGEFIIQATKDCVSKTLKRLEEKIHGRVLNHLLYLIRVSEKAFQRRVALALAHLCSAYDQRKIFIDHNGLKLLIGLLGSSCHKQQLDGAVALCKLANKAMSLSPIDAAPPSPTPQVYLGEQYVNNATLSDVTFLVEGKWFYAHRICLLASSDAFRAMFDGGYRKRI* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3573 236 Gene3D Potassium Channel Kv1.1; Chain A 188 235 IPR011333 -
Psa3g3573 236 Gene3D - 1 93 IPR011989 -
Psa3g3573 236 Gene3D - 94 175 IPR011989 -
Psa3g3573 236 ProSiteProfiles BTB domain profile. 199 236 IPR000210 GO:0005515
Psa3g3573 236 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2-LIKE 1 235 - -
Psa3g3573 236 SUPERFAMILY ARM repeat 3 166 IPR016024 -
Psa3g3573 236 Pfam BTB/POZ domain 191 232 IPR000210 GO:0005515
Psa3g3573 236 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 1 235 IPR044282 -
Psa3g3573 236 SUPERFAMILY POZ domain 191 233 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3573 Psa-Chr3 301478505 301479215 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Psa3g3573 BTB 9e-09 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3573 - - gmx:100812456 409.838