Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3561 ATGATCATGATCATCAAGTATTCAACATTCAACAAACTCATTACCCATCTCCACTATCCCACATGCAAATTTCAATATTATACAAAAATAACAATCATTTCAAACTATAATAACAACAACACAAACTTGTGGAATCAATCATCTAAAACAATGAACAATTTTCACAAATTCCCTCTTCTTGTAACTCTATTGTTTCTCATATTTGGAAAATCAGTAACATCAAAAAATGGATGCATTCAGAAATGTGGTAATCTTCACATTCAATTTCCATTTCATCTCAAAAACAACATCAATCACACCAAACACTATCCTCAAAACTTCCAATTATCATGTACTGATAAACATCAAACAGTGTTAGAATTTCCCAAACTTTCACTCAAGCTTTTCATCAAACACATAGACTACAAAACACAAAAACTTCAAATCTACGACCCAAATAACTGTCTTTCAAATCAGTTATTCAAACTAGGAAACTCGTCGGTTTCGCCTTTCCAGTTTCACTTCCATGAGTTTAATATACAGCGCAATGTTTCGTTCTTTCATTGTGATTCGAAAAATGGATGTTTGATTAAGCAGCGTGATTCTGGTGCGGATTTTATTGATCCTGAATTGGTTTCTTGTAGAAAAGTGAGTGATGTTTTAAATGTGGGTTGGATGATTGAAGAATGGGAGGGTGATGATCTTACAGAGAGTTTGATTATGGAATGGTCTAAACCTAATTGTAGTTTTTGTGAAGTTCAAGGGAAGAAATGTCAATGGAAGAATGGTACTAGAAGTGGTGAAGTTGAATGTTTTGTTTGTTCATCAAATGGGATTGCTAGATCTACTGTTCTTCTAATTACTGCTGGGGTTGTAGTTGGTTCCATGATTTTGCTGCTATTGGTGAATGGTTTGCTTCACATTTATCGCTATTTTAAGATGAAAGGAGATGACATGGCAAGGATAGAGAAGTTCTTAGAGGATTATAGAGCAATGAAACCTACAAGATTCACTTATGCTGATATTAAGAGAATAACAAATGGTTTTAAGGAGAGATTAGGAGAAGGAGCTCATGGAGCAGTGTTTAAAGGCATGTTATCCCAAGAAATTTTGGTTGCTGTGAAGGTACTCAACGAAACACAAGGAGATGGAAAAGATTTCATTAATGAAGTTGGAACCATGGGAAAAATTCATCATGTCAATGTAGTTCGTTTGCTTGGATTTTGCGCCGACGGATTCCACCGTGCGCTTGTCTATGATTTCTTTCCAAATGGGTCATTGCAAAATTTCTTGGCACCACCGGAGAACAAGGATGTTTTTCTCGGTTGGGAAAAGTTGCAACAAATTGCTCTTGGTGTTGCAAGAGGGATTGAGTATCTTCACATTGGTTGTGATCATAGAATAGTTCACTTTGATATCAATCCACACAATGTGTTAATAGATGATAATCTGAGTCCCAAACTTACTGATTTTGGACTTGCGAAATTGTGTCCGAAAAATCAAAGCACCGTGTCTATGACCGCAGCTAGAGGAACTTTGGGCTACATTGCACCTGAAGTTTTCTCAAGAAACTTTGGAAATGTGTCTTATAAGTCTGACATTTATAGCTATGGAATGTTGTTGCTCGAGATGGTTGGTGGAAGAAAGAATACTAATGTGTCGGCGGAGGAAACATTCCAAGTTTTGTATCCGGAATGGATCCATAATCTGATTGAAGGAAAAGATGTGCTAGTTAATATTGAGGATGAGGGGGGTGTTAGAATTGCAAAGAAACTCGCGCTTGTGGGACTTTGGTGTATTCAGTGGAATCCGGTGGATCGTCCGTCTATGAAAACTGTGGTACAAATGCTTGAAGGGAAAGGAGAAAAATTAATGGCACCCCCTACTCCTTTTGACTCTGTTGGATATGATAGAACAAAAGCTGTTATTCCAACCCGGCATTCGAGTTTTGAGTTAGAAGTTATTCCTGAAATAGAGTAA 1959 0.3696 MIMIIKYSTFNKLITHLHYPTCKFQYYTKITIISNYNNNNTNLWNQSSKTMNNFHKFPLLVTLLFLIFGKSVTSKNGCIQKCGNLHIQFPFHLKNNINHTKHYPQNFQLSCTDKHQTVLEFPKLSLKLFIKHIDYKTQKLQIYDPNNCLSNQLFKLGNSSVSPFQFHFHEFNIQRNVSFFHCDSKNGCLIKQRDSGADFIDPELVSCRKVSDVLNVGWMIEEWEGDDLTESLIMEWSKPNCSFCEVQGKKCQWKNGTRSGEVECFVCSSNGIARSTVLLITAGVVVGSMILLLLVNGLLHIYRYFKMKGDDMARIEKFLEDYRAMKPTRFTYADIKRITNGFKERLGEGAHGAVFKGMLSQEILVAVKVLNETQGDGKDFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQNFLAPPENKDVFLGWEKLQQIALGVARGIEYLHIGCDHRIVHFDINPHNVLIDDNLSPKLTDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNVSAEETFQVLYPEWIHNLIEGKDVLVNIEDEGGVRIAKKLALVGLWCIQWNPVDRPSMKTVVQMLEGKGEKLMAPPTPFDSVGYDRTKAVIPTRHSSFELEVIPEIE* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3561 652 Gene3D Phosphorylase Kinase; domain 1 315 414 - -
Psa3g3561 652 Gene3D Transferase(Phosphotransferase) domain 1 415 619 - -
Psa3g3561 652 PANTHER RUST RESISTANCE KINASE LR10-RELATED 95 652 IPR045874 GO:0004672
Psa3g3561 652 SUPERFAMILY Protein kinase-like (PK-like) 322 611 IPR011009 -
Psa3g3561 652 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 95 652 - -
Psa3g3561 652 Pfam Protein kinase domain 343 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3561 652 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Psa3g3561 652 Pfam Wall-associated receptor kinase galacturonan-binding 78 144 IPR025287 GO:0030247
Psa3g3561 652 ProSiteProfiles Protein kinase domain profile. 340 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3561 Psa-Chr3 300609455 300612038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3561 237 623 Receptor kinase-like Gene Family AT1G66910 44.110 1.72e-104 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Psa3g3561 Pkinase 8.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3561 - - gmx:100819302 879.011