Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3559 ATGGGTCATGGGTTTCTTGTTTCCATTGCTTATATAGACCCTGGAAACTTTGAGACAGATCTACAATATGGGGCACAATATAGATATGAGTTACTTTGGATCATATTGGTGGCATCATGTGCTGCTCTTGTAATTCAATCAACGGCTGCAAATCTTGGGGTGATCACTGGAAAGCCCTTAGCGGAGCATTATAGAGCTGAATATTCCGGCGTGTCTAACTTTATTCTTTGGGTTATTGCTGAAATCGCCATAGTGGCCCGTGACATCTCAGAAACTACATTGATGCTCTTAGCATTACAGCAATATGGGGTTAGGAAACTTGAATTCTTGATTGCATTTCTCGTGTTTACAATTGCTGCCTGTTTTTGGGCTGAGCTTGGATATGCCAAGCCTGATGCTAAAGAAGTTGGGAAGGGTCTTTTTGTGCCACAACTAAAAGGGAATGGAGCTACTGGTCTTGCAATTTCACTCCTCGGTTCTATGGTTATGCCCCACAATCTCTTCCTGCACTCGACATTGGTACTTTCTAGGAAAATACCTCGATCAGTTCGTGGAATCAAAGAGGCTTGCAGTCATGGGTGGCTCTGCTGGGGCTGGGAAGCTCATCATAATTGCATCTATGATTTTATCATTTGA 636 0.4308 MGHGFLVSIAYIDPGNFETDLQYGAQYRYELLWIILVASCAALVIQSTAANLGVITGKPLAEHYRAEYSGVSNFILWVIAEIAIVARDISETTLMLLALQQYGVRKLEFLIAFLVFTIAACFWAELGYAKPDAKEVGKGLFVPQLKGNGATGLAISLLGSMVMPHNLFLHSTLVLSRKIPRSVRGIKEACSHGWLCWGWEAHHNCIYDFII* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3559 211 Pfam Natural resistance-associated macrophage protein 93 184 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa3g3559 211 Pfam Natural resistance-associated macrophage protein 17 91 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa3g3559 211 PANTHER METAL TRANSPORTER NRAMP1 92 192 - -
Psa3g3559 211 PANTHER METAL TRANSPORTER NRAMP1 1 91 - -
Psa3g3559 211 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 91 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa3g3559 211 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 92 192 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3559 Psa-Chr3 300586161 300586867 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3559 1 192 Inorganic Solute Cotransporters AT1G15960 74.194 1.16e-105 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3559 K21398 - lja:Lj3g3v0013380.1 313.538