Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3532 GACCAACCCTCACCCTACCACCAGGCCTTGCATTCACCACAAACAAGACACCACAATCACATGATCATATGTTGCACTTACAGTGGTTATTTGGACAAGACAACTCATGTGTATTTGGCACTGAATTCACCTTGGCAAGCATCCTGCAATCGTGGTCCTGCAGCAGCCATAACCCTGTCATCATCCTATAGATTCATGCAAATCATGGCCAAAATAGCAGGTATACAACATCAAAACCTTGGTCCTGTACAACACCATATCATGACTGCAGTGATCCAAATGAAGGCCGATGCTCTCTATCTGCTGCAAAAGTATGATGCAGCAATTCAGCTTTGTGACCAGAGTCTGAATCTTGCAGAAAAGAATTTTGTCTTGGCAAACAGTGTGAACAATTCCATGCATAATAGTTACTCAAGTGTAAAAATGTGGAGATGGTCATTTATATCTAAGTGTTACTTTCGTTTGGGGAAGCTTGATGCATCACTTAATGTTATTGAAAAATTACAGCAAACAGCATCTGCCAATGACAAGTGTGGGATTGATAACATTGAAGAGTTGCTGTCATTAGCTGCTACAATACAAGAACTTCTAGATCACAGGAAAGCAGGAAATGAGAACTTCAAAATGGGAAAGTATACAGAAGCGGTGGAGAACTACACTGCTGCTTTATCTAGTAATATCAAATCACGCCCTTTTGCAGCAATATGTTTTGGCAACCGTGCTGCTGCACATCAAGCTTCAGGCCAAATTGCTGATGCCATTACGGACTGCAGCATGGCTATGGCCCTTGATGGAAATTATGCAAAGGCAATTTCTAGAAGAGCCACCTTGCATGAGATGGTTAGAAATTATGAACAAGCAGCTTGTGACATCCGGAGACTTATTTCTGTTCTTGGATCTCAATCCAATGAAAAGGCCAAACATTCTGAATCTCCAAATGGATCAACTGGTGGCAAAGAATCAAGGCAAGCTCAACAACGTCTGCTTGCTGTGGAAGATCAAGCCAAAATGAGGACCCCCTTGGACTTTTATCTCATTTTAGGTATTAAACCAGCTGATACAGCAGCTGATATCAAGAAGGCATATCACAAGGCAGCTCATGGACTGCTTCCTTTGTGCGCTCCACTCCATACAGATTTTGCCTGTCCTCCTGCATCAGCAACTGTTGTTCCATTAATGAATATCAGCGAAGTTCCACCTAAGACAGAACAAGGAGATATTACACTACAAAACCCTCTTAGAGAGAGGAAGACCATAAATTCAGAGTTATGGCATGCTTGTGTCGAGCCATTGGTTTCTATACCTCCTGTTGGAAGTCTTGCTGTTTACTTTCCTCAAGGACACGGCGAGCAAGTTGCAGCATCCATGCAAAAAGAGGCTAAGCGGTCAAGTGCAATTTTACACAAAGTAATTACTGAAGCTATACCAGATACTGTTGGTTCAAAACTTATTGGACTTGTGACATCAAGAGCAGAAATACCCGAGCTACTTAAGTTGGATGATGTGATTGGTCTGGTGATTCCAAGAGGCAGCAACAAACTTGTTTCTGATATCAAAAGTTCCACGAAAATCCCTGTTCTAGGTCATGCTGACGGGATTTGTCACGTCTATGTTGATAAATCTGCAAATTTGGAGATGGCTAAGCAGATTGCACTCGATGCAAAAACAGTTTATCCAGCAGGATGCGATGCCATGGAAACACTTCTTGTTCATAAGGATTTGTATTGTTTGTTGGCTTGCACTGTTGAAATCGTTGATGATGTTTATGCAGCTATCG 1777 0.4204 DQPSPYHQALHSPQTRHHNHMIICCTYSGYLDKTTHVYLALNSPWQASCNRGPAAAITLSSSYRFMQIMAKIAGIQHQNLGPVQHHIMTAVIQMKADALYLLQKYDAAIQLCDQSLNLAEKNFVLANSVNNSMHNSYSSVKMWRWSFISKCYFRLGKLDASLNVIEKLQQTASANDKCGIDNIEELLSLAATIQELLDHRKAGNENFKMGKYTEAVENYTAALSSNIKSRPFAAICFGNRAAAHQASGQIADAITDCSMAMALDGNYAKAISRRATLHEMVRNYEQAACDIRRLISVLGSQSNEKAKHSESPNGSTGGKESRQAQQRLLAVEDQAKMRTPLDFYLILGIKPADTAADIKKAYHKAAHGLLPLCAPLHTDFACPPASATVVPLMNISEVPPKTEQGDITLQNPLRERKTINSELWHACVEPLVSIPPVGSLAVYFPQGHGEQVAASMQKEAKRSSAILHKVITEAIPDTVGSKLIGLVTSRAEIPELLKLDDVIGLVIPRGSNKLVSDIKSSTKIPVLGHADGICHVYVDKSANLEMAKQIALDAKTVYPAGCDAMETLLVHKDLYCLLACTVEIVDDVYAAI 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3532 592 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 538 587 IPR016163 GO:0016620
Psa3g3532 592 SUPERFAMILY TPR-like 199 296 IPR011990 GO:0005515
Psa3g3532 592 SUPERFAMILY ALDH-like 452 575 IPR016161 GO:0016491
Psa3g3532 592 SUPERFAMILY Chaperone J-domain 324 366 IPR036869 -
Psa3g3532 592 CDD DnaJ 342 366 IPR001623 -
Psa3g3532 592 Gene3D Tetratricopeptide repeat domain 195 314 IPR011990 GO:0005515
Psa3g3532 592 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 447 537 IPR016162 GO:0016491
Psa3g3532 592 MobiDBLite consensus disorder prediction 301 323 - -
Psa3g3532 592 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 92 366 - -
Psa3g3532 592 SUPERFAMILY TPR-like 93 177 IPR011990 GO:0005515
Psa3g3532 592 MobiDBLite consensus disorder prediction 301 325 - -
Psa3g3532 592 Gene3D DnaJ domain 315 386 IPR036869 -
Psa3g3532 592 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 92 366 - -
Psa3g3532 592 SMART tpr_5 234 267 IPR019734 GO:0005515
Psa3g3532 592 SMART tpr_5 268 301 IPR019734 GO:0005515
Psa3g3532 592 SMART tpr_5 89 122 IPR019734 GO:0005515
Psa3g3532 592 SMART tpr_5 142 175 IPR019734 GO:0005515
Psa3g3532 592 SMART tpr_5 196 229 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3532 Psa-Chr3 296661556 296663769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3532 411 478 B3 DNA Binding Superfamily AT5G20730 54.430 5.39e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3532 K09527 - gmx:100809278 421.779