Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3524 ATGAGTAACTTGTACTTGATCTTGCTTCACATTTTCCTAATCTTTGTGTTGACACATTCAGCACCTAAAGGATCTCTTATAACCAATGTTCCAGGCTTCAATGGATCTCTACCTTCAAAGCACTATGGAGGGTATGTGACAATAGATAAAAGTCACGGTAAGAACTTGTATTACTATTTTGTTCAATCAGAAGGTAATCCATCAAAGGATCCAATTGTTCTATGGCTGAATGGTGGACCAGGATGTTCTAGTTTTGATGGTTTTGTATATGAACATGGTCCTTTTAATTTTGACAAACCTGTCAATGGATCCTTGCCTAAGTTGCATCTTAATCCATACAGTTGGTCAAAGGTTTCCAACATTATATATTTGGACTCACCGGTTGGAGTAGGATTTTCGTATTCGAAAAATACATCTCAGTATGAAACTGGAGATGAAAAGACTGCCACTGATTCACATACTTTTCTCCTCAAATGGTTTGAATTATATCCTGAGTTTCTTGCAAACCCCTTATTCCTTGCTGGAGAATCTTATGCTGGAGTTTATGTGCCTACTCTTGCTCATAAAGTAGTACAAGGAATTGAAGCTGGTATCAAACCTAAACTGAATTTCAAGGGTTATTTGATTGGAAATCCAGTTGCTGATGAAATATTTGACGGCAATGCTCTTGTTCCTTTTGCACACGGAATGGGTCTTATCTCTGATCAAATACTCAAGAACATAACAAAAGCATGCAACGGGACTTTCTACACAACAAACTCTAGTGACTGTAACCATTGGTTGTCGAACCTTGATGATATCGTTGATGGCTTAAACATATATAACATACTAGAGCCATGTTATCATGAGGATAATGAGGAGATTCACGAAAACAAATCTAAGTTGCCATTAAGCTTTAGGCAATTGGGAAAAACTGAAAAATCTCTAGCGGTAAGAAAAAGAATGTTTGGTCGTGCATGGCCCTATAGAGCTAATTTGAGAGATGGAATTGTTCCAAGTTGGCCAGAAATTACAAGCAATAGTCTCAGTGCTCCGGCTTGCGTTAACGACGAGGTTGCCAGGAATTGGTTGAACAATCTAGAGGTCAGGAAAGCCATTCACACCGCGGAGGAAAGTGTAGTTAGGAGATGGGAGTTATGTACATTCCAGCTTGAATACGATCATGATCTAGGGAGTATGATTCCTTACCACAAGAATCTTACTTCCAAAGGATACTCAGCATTGATATTTAGTGGTGATCATGATATGTGTGTCCCATTCACCGGAACTCAAGCATGGACAAGATCACTTGGATATAAGATTGTTGATGAATGGAGACCATGGTTAATCAATGATCAAGTTGCAGGGTTTATACAAGGATATGCCAACAATCTCACATTTCTGACTATAAAGGGAGCTGGACATACTGTTCCAGAATATAAACCTGAGGAGGCATTGTACTTTTACAAACATTTTTTGGATGGAACTCCTATATAA 1476 0.3848 MSNLYLILLHIFLIFVLTHSAPKGSLITNVPGFNGSLPSKHYGGYVTIDKSHGKNLYYYFVQSEGNPSKDPIVLWLNGGPGCSSFDGFVYEHGPFNFDKPVNGSLPKLHLNPYSWSKVSNIIYLDSPVGVGFSYSKNTSQYETGDEKTATDSHTFLLKWFELYPEFLANPLFLAGESYAGVYVPTLAHKVVQGIEAGIKPKLNFKGYLIGNPVADEIFDGNALVPFAHGMGLISDQILKNITKACNGTFYTTNSSDCNHWLSNLDDIVDGLNIYNILEPCYHEDNEEIHENKSKLPLSFRQLGKTEKSLAVRKRMFGRAWPYRANLRDGIVPSWPEITSNSLSAPACVNDEVARNWLNNLEVRKAIHTAEESVVRRWELCTFQLEYDHDLGSMIPYHKNLTSKGYSALIFSGDHDMCVPFTGTQAWTRSLGYKIVDEWRPWLINDQVAGFIQGYANNLTFLTIKGAGHTVPEYKPEEALYFYKHFLDGTPI* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3524 491 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Psa3g3524 491 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 13 489 - -
Psa3g3524 491 SUPERFAMILY alpha/beta-Hydrolases 27 490 IPR029058 -
Psa3g3524 491 Pfam Serine carboxypeptidase 31 488 IPR001563 GO:0004185|GO:0006508
Psa3g3524 491 Gene3D - 344 491 - -
Psa3g3524 491 ProSitePatterns Serine carboxypeptidases, histidine active site. 458 475 IPR033124 GO:0004185
Psa3g3524 491 Gene3D alpha/beta hydrolase 20 321 IPR029058 -
Psa3g3524 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Psa3g3524 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Psa3g3524 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Psa3g3524 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 458 471 IPR001563 GO:0004185|GO:0006508
Psa3g3524 491 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 489 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3524 Psa-Chr3 296218452 296221444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3524 352 491 Calmodulin-binding Proteins AT2G22960 47.857 3.59e-43 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3524 K16296 - gmx:100792057 736.873