Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3501 ATGTCCTTCAATCAATCAAAGTCCGATAAGAGTGACACTGTGAACCGACGATCCGGCCGATCCGCCAGCTTCAATCAGCAGCGAGGTTCCACCGGTGGTTCATACGTCAAGAGCGGCACCGGCGGGGCCGTGCCTTCTGTCTCCTCTTCTCGGAGTTTTAACAAGAAGTCTAATAATCATGCACAAGGTGGACCATCTAGGGTAAACCCAACCCCAGCAACTTCAACTGTGCCTAATTATGCTTCTGCAGTTCGAGCAACACCGAATGGTTCCCATGTGCAACAGCCACAATTTCATGGAGGGTCTGATGCTTCAGTTACTAATGCAACTGCCAAGCCATCCGAATCATCAGCTGTACAAAGGAGCACCGGAGTTGTTTCTAAAGCTCCTATTTCTCAACCTCCCTCCGTGAGTTCTGGTTCAGCAGCACCTACAACTCCTGCTAAGGATGCATCCAAGGCTTTCCCTTTCCAATTTGGATCTCTTAGTCCTGGTGTTATGAATGTGATGGCAATTCCTGCTCGCACAAACTCGGCTCCTCCTAATTTTGATGAGCAGAAGCGTGATCAGGCTCACCATGATTCTTTAAGGCCTGTGCCTTCTGTGCCAACACCTCCTGGTCCAAAGCAGCTGCCAGCAAAAAAGGATACAGGTGCCTTTGACCATAAGGCTGGGGAGACTCATACTGGTACAGTGGCAAAAAAGGATGCTCAAGTGTCACCTTTACCCCCAGCAAATCTAATGCAGAAGCCTTCTGTTATTCCTCTAGCTGGAATTTCAATGCCAGTGCCATATCACCAGTCACAGGCACCTGTACACTTTGGTGCTGCTAAGCCACAAATTCAATCTCATGGTATGTCAACAGCACCTCTTCAGATTCCTTTACCAATGCCTTTTCCAATTGTAAGTGCTGCACAAGTGCAACAACAGGTATTTGTTCCAAGTCTTCAACCTCATCCTATTCATCCACAAGGAATCATGCATCAAGTCCAAAATATAGGTTACAGTCCTCAAATTGGTCATCAAATGCCCCATCATTTTGGCAATATGGGTATGGGCATCAACCCACAATATTCCCCACAGCAAGGAGGAAAAATTGCTGTACCTCGGAAAACCACTCCTGTGAAAATAACTCACCCTGATACACACGAAGAGCTTAGACTTGATAAAAGGGCAGCTGGTGGTGGGTCATCAGGTGGTAGGTCTCATTCTGGCATGCTTTCTCAATCTCAATCTGTCCAGAGCCAGATTACAACCAATGCTCAGCCACCAAGAGTTTCCCGTGACGTGCCTAATGCAATCCCGTCAACTCTTTTAGGAGTATCTTCTGTATCTATAAAGCCAAGTGGTGGGTCTGGTATTGTAAACTCATCATTTGCCAATTCCAATATTTCTGGTGCTCAAAAAGGTGGATCTCCTAGTTCCTCAGTAACATCTAGTGATGTTCACTCTTTGGTGCCACCAAAAGGGCCTGAAATTTGTTCGGAAATCTCTTCCCAACAATCTACTGCTGCATCTGCTTTTGCTGAGAAGCTTACAACAGATTCCTTGTTGCCTTCTTCAACTGCTATTAGTGAGAATTCTGTTTCAGCTGTATCCAATATCGAAGGCAGAAACAACGAATCTCTTAGTAGGTCAAATTCTTTGAAGGATAATCAGAAGAAACTACAAAAGAAAGGCCAATTGCAGCATCAGGTGGCTGTGCAATCTTCTGCTGTGGCTAATAAACCTTCCCTAGCTGGTGATGGTTGTATCTCTGATTGTGTAGTTTCTGAAATTGTAGGAACTAAAACACCCTATTCTGCAGCAACTGCCAATGAAGATCTTTTAGCAATAGCTTCTGGCACAAATTCAGCTACCAGTGAGAGCTTGCCTTCTCCTGTTGAAGAGAAGACCAATGGTTCTACGCAGGTGTCTGCTTGTGCTTCAGCTGAAGGACCTGTTACTCAAGCTGTGGATAGCTTGAACAATCATAAGAGTGATACGCTAGATGTATTATCCCGAGAGGGTAAACAGCTGAGGCAGAACAAATTAGCTGGTGATAAAACTGAAGATGCCTCTTTAAGCAGAAACGGAGGTGTAGTTAGTAATGAAGCCACTTCTACAAATTCTGGCACATCAGATCATCAATCTTCTGGCCATCTTGAAACAAATTTAAAACATTGCAAAGATGGTTCAGAGGATTCTGGCACTGGCTCAGCCTCTCTTCTGGCAGCATCAGTTACTATGGACAAACCAGTTTTAGAGCCAAGTAAGGTAAAAGGTACATCAAAGGGGAAAAAGAAACGAAAAGAAATTCTTCAGAAAGCAGATGCGTCTGGGTCAACAGCTGATCTTTATAATGCGTATAAGGGACCTGAGGAAAAGAAAGAAGCTGTTGCAAGTTCAGAGAGCACTGCAAATGTTTCTACTTCTGGAAATTCGAAGCAGCTGCCTATCGATGCTGCTCAGCCAGCTGTAGTTGCAAATGAACAATGTGGGCAGAGTAAGGCTGAATCTGAGGACTGGGAGGATGCTGCAGACATGTCCGCACCAAAGCTAGAAGTATCAGATAAAACTCAACAGGACAGCAATGGTAGTGCAGTTACTGACAAAAAGTACTCTCGAGATTTCCTTCTAAAATTTGCAGAGCAATGCTCTGATCTTCCTGAAGGGTTTGAAATCACGGCAGACTTAGCTGAAACTTTGATGGGTTCTAATATTGGTTCTCATGTTAATGAACGCGATTCATATCCTTCTGCTGGTAGAAACACAGATAGGTCAGGTGGCATGTCTCGGATGGATCGTCGCGGAAGTGGCATTATTGAGGACGATAAATGGAGTAAAGCTTCTGGTGCTTTTCATTCTGATATGCGCTTGGATGGTGTTGGAGGTAGTGCAGGATCCCGACCAGGCCAAGGAGGTAATTTTGGTGTTTTAAGGAATCCGCGCACACAGACAACTATACAATATGGAGGGATTCTATCTGGGCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAATAGCCCTGATGGTGAAAGGTGGCAGCGTGCTGCTAGCTTCCCGCAGAGGGGTTTAATTCCATCTCCTTCTCAATCTCCTTTGGTGACGATGCACAAAGCTGAGAAGAAGTATGAGGTTGGTAAAGTAACAGATGAGGAACAGGCGAAGCAGAGACAGTTGAAGGGTATATTGAACAAGTTAACTCCACAGAATTTTGAGAAACTTTTTGAGCAGGTAAAAGCAGTTAATATTGACAATGCAGTCACTCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCCTTGATGGAACCTACCTTCTGTGAAATGTATGCCAATTTCTGTTTTCATCTGGCAGCTGCATTACCTGATCTCAGTCAAGACAATGAAAAGATAACATTTAAGAGATTATTGTTAAACAAGTGCCAGGAAGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAATCAAGCTGATGAGGGTGAGGTGAAACAGTCTGACGAGGAAAGAGAAGCAAAACGATCCAAGGCTAGAAGACGAATGTTGGGTAATATCAGATTAATTGGAGAGCTATATAAGAAGAGAATGCTGACAGAGAGGATAATGCACGAGTGCATCAAAAAGCTACTGGGTCAGTGTCAGAATCCTGACGAAGAAGATATTGAAGCTTTATGCAAACTGATGAGTACTATTGGGGAGATGATTGATCACCCCAAAGCCAAGGAACATATGGATGTATATTTTGAAAGGATTAAATTATTATCAAACAACATGAGTTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATACCATTGATTTGAGAAAGAATAGATGGCAACAAAGGAGAAAAGTTGAAGGTCCAAAGAAGATTGAAGAGGTGCACCGAGATGCTTCCCAAGAGAGGCAATCCCAAGCTGGTAGGCTGGGTCGTGGTATGGGTATTAGTGCAGCAAGAAGGGCCCCTATGGATTTTGGTTCAAGAGGTTCATCTATTTTATCCCCTCCTAATGCTCAGATGGGTGGATTGCCCACTCAAGTTCGTGGGTATGGTTCTCAGGACGTTCGTGGATATGAAAGGCAATCATCGTATGAGGCTAAGACACTGTCTATTCCCTTGCCTCAAAGATCTTCAGGTGATGAGTCAATAACCCTAGGACCCCAAGGTGGTCTTGCTAGAGGAATGTCCATTAGAGGTTCTCCAGCAGTTTCAAATTTTGCTGGCCCTAACAGTTATAGTAATTTACCGGAGCGCGCTTCATACAGCCCTAGGGAGGACTTGACACCAAGATATATTCCAAATAGATCTGCTGGTCCAACTGCTTATGATCTATCAAGTGCTCAAGACCATAGTATGGATTACCATAATAAGGATTTGAGAAATGCAGATAGGTTTCTTGATAGACCTGGTGTCAATTCACCTCCTGCCCAAGTACAAGAGACAGTATTCTCCCAGAATACCTCTTCAGAAAAGGGTTTGTCAGATGAGAAACTACAGAACATGTCCATGGCAGCAATTAGAGAATACTATAGTGCTAGAGATGTGAATGAAGTTGTTTTGTGCGTCAAAGATCTGAACTCTCCAAGCTTTCATCCTTCCATGGTCTCTCTCTGGGTCACAGATTCATTTGAGAGAAAGGACACACACAGAGATCTTTTGGCCAAATTGCTGATGGACCTTGTGAAATCTCATGGTGGTACCTTAAGTCAAGCCCAGCTCATCGAAGGGTTCGAATCTGTTTTAAGTACTTTGGAAGATGTGGTTACGGATGCCCCAAAAGCACCAGAGTATCTTGGCTGCATTTTTGCCAAAGCTATAACGGAGCATGTAGCCTCATTGAAAGAGATTGGGCGGTTAATACAAGATGGCGGATATGAATCAGGGAGCCTTTTACAAATTGGACTTGCAGCTGACATTCTTGGAAGCACCTTGGAAGTGATACAAACAGAGAAGGGTGATGTCTTCTTGAATGAGATTCAGACAAGCTCCAACTTGCAGTTGCAGACCTTCCTGCCTCCAGGACCTATTAAATCTCGCAAGCTAGAGAAATTCATTTAG 5052 0.4404 MSFNQSKSDKSDTVNRRSGRSASFNQQRGSTGGSYVKSGTGGAVPSVSSSRSFNKKSNNHAQGGPSRVNPTPATSTVPNYASAVRATPNGSHVQQPQFHGGSDASVTNATAKPSESSAVQRSTGVVSKAPISQPPSVSSGSAAPTTPAKDASKAFPFQFGSLSPGVMNVMAIPARTNSAPPNFDEQKRDQAHHDSLRPVPSVPTPPGPKQLPAKKDTGAFDHKAGETHTGTVAKKDAQVSPLPPANLMQKPSVIPLAGISMPVPYHQSQAPVHFGAAKPQIQSHGMSTAPLQIPLPMPFPIVSAAQVQQQVFVPSLQPHPIHPQGIMHQVQNIGYSPQIGHQMPHHFGNMGMGINPQYSPQQGGKIAVPRKTTPVKITHPDTHEELRLDKRAAGGGSSGGRSHSGMLSQSQSVQSQITTNAQPPRVSRDVPNAIPSTLLGVSSVSIKPSGGSGIVNSSFANSNISGAQKGGSPSSSVTSSDVHSLVPPKGPEICSEISSQQSTAASAFAEKLTTDSLLPSSTAISENSVSAVSNIEGRNNESLSRSNSLKDNQKKLQKKGQLQHQVAVQSSAVANKPSLAGDGCISDCVVSEIVGTKTPYSAATANEDLLAIASGTNSATSESLPSPVEEKTNGSTQVSACASAEGPVTQAVDSLNNHKSDTLDVLSREGKQLRQNKLAGDKTEDASLSRNGGVVSNEATSTNSGTSDHQSSGHLETNLKHCKDGSEDSGTGSASLLAASVTMDKPVLEPSKVKGTSKGKKKRKEILQKADASGSTADLYNAYKGPEEKKEAVASSESTANVSTSGNSKQLPIDAAQPAVVANEQCGQSKAESEDWEDAADMSAPKLEVSDKTQQDSNGSAVTDKKYSRDFLLKFAEQCSDLPEGFEITADLAETLMGSNIGSHVNERDSYPSAGRNTDRSGGMSRMDRRGSGIIEDDKWSKASGAFHSDMRLDGVGGSAGSRPGQGGNFGVLRNPRTQTTIQYGGILSGPMQSMVNQGGMQRNSPDGERWQRAASFPQRGLIPSPSQSPLVTMHKAEKKYEVGKVTDEEQAKQRQLKGILNKLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCFHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANQADEGEVKQSDEEREAKRSKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQCQNPDEEDIEALCKLMSTIGEMIDHPKAKEHMDVYFERIKLLSNNMSLSSRVRFMLKDTIDLRKNRWQQRRKVEGPKKIEEVHRDASQERQSQAGRLGRGMGISAARRAPMDFGSRGSSILSPPNAQMGGLPTQVRGYGSQDVRGYERQSSYEAKTLSIPLPQRSSGDESITLGPQGGLARGMSIRGSPAVSNFAGPNSYSNLPERASYSPREDLTPRYIPNRSAGPTAYDLSSAQDHSMDYHNKDLRNADRFLDRPGVNSPPAQVQETVFSQNTSSEKGLSDEKLQNMSMAAIREYYSARDVNEVVLCVKDLNSPSFHPSMVSLWVTDSFERKDTHRDLLAKLLMDLVKSHGGTLSQAQLIEGFESVLSTLEDVVTDAPKAPEYLGCIFAKAITEHVASLKEIGRLIQDGGYESGSLLQIGLAADILGSTLEVIQTEKGDVFLNEIQTSSNLQLQTFLPPGPIKSRKLEKFI* 1684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3501 1683 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 120 1672 IPR045208 GO:0003743
Psa3g3501 1683 MobiDBLite consensus disorder prediction 666 684 - -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 830 845 - -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 401 426 - -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 786 863 - -
Psa3g3501 1683 SUPERFAMILY ARM repeat 1048 1278 IPR016024 -
Psa3g3501 1683 SMART if4_15 1054 1276 IPR003890 GO:0003723|GO:0005515
Psa3g3501 1683 MobiDBLite consensus disorder prediction 689 713 - -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 535 550 - -
Psa3g3501 1683 ProSiteProfiles MI domain profile. 1495 1619 IPR003891 -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 617 645 - -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 848 863 - -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 741 771 - -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 1 149 - -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 1279 1312 - -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 371 429 - -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 1417 1437 - -
Psa3g3501 1683 Coils Coil 1136 1156 - -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 182 214 - -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 17 146 - -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 376 391 - -
Psa3g3501 1683 Pfam MIF4G domain 1054 1275 IPR003890 GO:0003723|GO:0005515
Psa3g3501 1683 MobiDBLite consensus disorder prediction 666 716 - -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 465 488 - -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 465 483 - -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 1146 1175 - -
Psa3g3501 1683 Pfam MA3 domain 1502 1606 IPR003891 -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 535 562 - -
Psa3g3501 1683 Gene3D - 1054 1289 - -
Psa3g3501 1683 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 120 1672 - -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 795 812 - -
Psa3g3501 1683 SUPERFAMILY ARM repeat 1489 1678 IPR016024 -
Psa3g3501 1683 MobiDBLite consensus disorder prediction 1279 1300 - -
Psa3g3501 1683 Gene3D - 1487 1683 - -
Psa3g3501 1683 SMART ma3_7 1496 1610 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3501 Psa-Chr3 295261060 295271315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3501 1 1682 Eukaryotic Initiation Factors Gene Family AT3G60240 44.340 0.0 1192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3501 K03260 - gmx:100790680 2109.72