Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3473 ATGGATTGTGTGGTAGTGGATTCGGACAAGGGCAACGAGGCAGATCGTAGCTGTCTAGAAGAGAGTACAAGTATATTTAATGGAGTTGAAGTTCAAGAGCCCTATGTGGGCATGGAATTTGATTCTGAAGAAGCTGCCAGAACATTTTATGTTGAATATGCTAGACGGGTAGGATTTGTTGTACGTGTTATGCAGCGTCGACGTTCTGGAATCGATGGCAGAACTCTTGCTCGTCGACTTGGGTGTAACAAACAAGGATTCTCACCCAATAGCAAGGGAACACCGGGGCAAGAAAAAAGACCAAGGCCCAGTGCCCGAGAAGGTTGCAAGGCAACAATTTTAGTTAAGATGGAAAAATCTGGAAAATGGGTTGTCACAAGATTTATAAAGGATCACAACCATCCACTAATTGCTACAGCTAATGGTTTCAGTACAGAGGACGATAAAGATAAGAAAATTGCTGAACTTACTATGGAGTTGAAGCGCCAAGATGAACTTTGTACTGCATATAGAGAAAAACTACTTAGCTTCATAAACAATGTCGAGGAACAAACAGAGGAAATGTCCACAAAAATTCAACTAATTATTGAAAATATAAGGAGAGCAGAAAGCCTCGGGACTGTACTTGAATGTATAGATGAATAA 645 0.4078 MDCVVVDSDKGNEADRSCLEESTSIFNGVEVQEPYVGMEFDSEEAARTFYVEYARRVGFVVRVMQRRRSGIDGRTLARRLGCNKQGFSPNSKGTPGQEKRPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPLIATANGFSTEDDKDKKIAELTMELKRQDELCTAYREKLLSFINNVEEQTEEMSTKIQLIIENIRRAESLGTVLECIDE* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3473 214 Coils Coil 178 198 - -
Psa3g3473 214 ProSiteProfiles Secretoglobin (SCGB) family profile. 165 214 IPR016126 -
Psa3g3473 214 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 4 204 - -
Psa3g3473 214 Pfam FAR1 DNA-binding domain 48 137 IPR004330 -
Psa3g3473 214 Coils Coil 153 173 - -
Psa3g3473 214 MobiDBLite consensus disorder prediction 82 107 - -
Psa3g3473 214 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 4 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3473 Psa-Chr3 293521679 293526083 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Psa3g3473 FAR1 3.6e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3473 - - vun:114183030 358.221