Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3465 ATGAGTAACTTGTACTTGATCTTGCTTAACATTTTCTTAACCTTTGTGGTGACACATTCAGCCCCTGAAGGGTCTCTTATAACCAATCTTCCAGGCTTCAATGGATCTCTACCTTCAAAGCACTATGGAGGGTATGTAACAATAGATGAAAGTCATGGTAAGAACTTGTATTACTATTTTGTTCAATCAGAAGCTAATTCATCAAAGGTCCCTATTGTTCTATGGCTAAATGGTGGACCAGGATGTTCTAGTTTAGATGGTTTCGTATATGAGCATGGTCCTTTTAATTTTGAAAAACCTGTCACCAAGGGAGCCCTGCCCAAGTTGAAACTCAACCCATACAGCTGGTCAAAGGTGTCTAATGTTATATATTTGGACTCTCCAGCTGGAGTAGGATTTTCGTATTCAAAAAATGTATCTGATTATAAAACTGGAGATAAACAGACGGCAGCGGACATACATACTTTTCTCCTTAAATGGTTTGAATTATATCCTGAGTTTCTTGCAAACCCCTTATACCTTGCTGGGGAATCTTATGCTGGAGTTTATGTGCCTACTCTTGCTGATAAAGTAGTAAAAGGAATTGAAGCTGGTATCAAACCCAAACTGAATTTTAAGGGTTATTTGATTGGAAATCCTGTTGCTGATCCAATATTTGATGGCAATGCTCTTGTTCCTTTTGCACACGGAATGGGTCTTATCTCTGATCAAATATTTGAGAACACAACAAAAACATGCAATGGGACTTTCTATCCACCAGATTCCGTTGCGTGCAGCAATTTATTGTTAAAAATAGACAGTATAATCCATCACTTAAACATATATGACATTTTAGAACCATGTTATCATGGTGATGATACAGAAGAGAATCAGAAAAACAAATCTAAGTTGCCATTAAGCTTTAGGCAATTGGGCAAAACTGAAAAATCTCTTCCTGTAAGAAAAAGGATGTTTGGTCGAGCTTGGCCTTATGGAGCTATTGTGAAAGATGGAATTGTTCCATCTTGGCCACAACTTAACAGCAAAAGTCTCATTGCTCCCCCTTGCTTTGACGATGAGATTGCTATGGTATGGTTGAACAATCCAGATGTGAGAAAAGCTATTCACGCTGCGGAGAAAAGTGTAGTTAGTGATTGGAACTTATGCACGGACCAACTTGAATACGATCATGATCTAGGGAGTATGATCCCTTACCACAAGAATCTTACTTCCAAAGGATACTCGGCATTGATATTTAGGTTAATCTTCCAACATAACATTGTTTTAGGTTTATTCTTATAA 1281 0.3778 MSNLYLILLNIFLTFVVTHSAPEGSLITNLPGFNGSLPSKHYGGYVTIDESHGKNLYYYFVQSEANSSKVPIVLWLNGGPGCSSLDGFVYEHGPFNFEKPVTKGALPKLKLNPYSWSKVSNVIYLDSPAGVGFSYSKNVSDYKTGDKQTAADIHTFLLKWFELYPEFLANPLYLAGESYAGVYVPTLADKVVKGIEAGIKPKLNFKGYLIGNPVADPIFDGNALVPFAHGMGLISDQIFENTTKTCNGTFYPPDSVACSNLLLKIDSIIHHLNIYDILEPCYHGDDTEENQKNKSKLPLSFRQLGKTEKSLPVRKRMFGRAWPYGAIVKDGIVPSWPQLNSKSLIAPPCFDDEIAMVWLNNPDVRKAIHAAEKSVVSDWNLCTDQLEYDHDLGSMIPYHKNLTSKGYSALIFRLIFQHNIVLGLFL* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3465 426 Gene3D - 345 413 - -
Psa3g3465 426 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Psa3g3465 426 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Psa3g3465 426 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Psa3g3465 426 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Psa3g3465 426 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 13 412 - -
Psa3g3465 426 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 412 IPR001563 GO:0004185|GO:0006508
Psa3g3465 426 Pfam Serine carboxypeptidase 31 412 IPR001563 GO:0004185|GO:0006508
Psa3g3465 426 SUPERFAMILY alpha/beta-Hydrolases 27 412 IPR029058 -
Psa3g3465 426 Gene3D alpha/beta hydrolase 19 322 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3465 Psa-Chr3 292596085 292598174 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3465 354 412 Calmodulin-binding Proteins AT2G22960 38.983 4.97e-07 48.1