Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3464 ATGAGTAACTTGTACTTGATCTTGCTTCACATTTTCTTAACCTTTGTGTTGACACATTCAGCACCTAAAGGATCTCTTATAACCAATGTTCCAGGCTTCAATGGATCTCTACCTTCAAAGCACTATGGAGGGTATGTGACAATAGATAAAAGTCATGGTAAGAACTTGTATTACTATTTTGTTCAATCAGAAGGAAATTCATCAAAGGATCCAATTGTTCTATGGCTGAATGGTGGACCAGGATGTTCTAGTTTTGATGGTTTCGTATTTGAACATGGTCCTTTTAATTTTGAAAAACCTGTCACCAAGGGAGGTTTGCCTAAGTTGAAACTCAACCCATACAGCTGGTCAAAGGTGTCAAACATTATATATTTGGACTCACCTGTTGGAGTAGGATTTTCGTATTCGAGAAATGAAACTGATTATGGAACTGGAGATGAACAAACTGCATTAGACACACATGTTTTTCTCCTTAAATGGTTTGAATTATATCCTGAGTTTCTTGCAAATCCATTATTCCTTGCTGGAGAGTCTTATGCTGGAGTTTATGTGCCTACTCTTGCTCATAAAATAGTAAAAGGAATTGAAGCTGGTATCAAGACCAAACTGAATTTCAAGGGTTATTTGATTGGAAATCCTGTTGCTGATGAAGAATTTGATGGCAATGCTCTTGTTCCTTTTGCACACGGAATGGGTCTTATATCTGATCAAATATTTGAGGATACAGTAAAAGCATGCAACGGGACTTTCTATATAACAGATTTCGATCCTTGCAGCAAATTAATTTCAAAAATACACAGTATAATTCGCGCCTTAAACAGATATGACATTCTAGAACCATGTTTTTATGGTGATGAGAAAGAAGAGAATCACAAACACAATCCTAAGTTGCCATTAAGCTTTAGGCAATTGGGCAAAACCGAAAAATCTCTTCCGATAAGAAAAAGGATGTTTGGTCGAGCTTGGCCCTATGGAGCTATTGTGCAAGATGGAATTGTTCCAAGTTGGCCACAACTTATCAGCAATCTTAACACTGCACCTCCTTGCACCGACGATGAGATTGCTATGGTATGGTTGAACAATCCAGATGTGAGAAAAGCTATTCACACTGTGGAGAAAAGTGTAGTTAGCGAATGGGTCTTATGTACAAGTAAAGTTATATACCATCATGATCTAGGGAGTATGATCCCTTACCACAAGAATCTTACTTCAAAAGGATACTCGGCATTGATATATAGTGGTGATCATGACATGTGTGTCCCATTTACTGGAACGGAAGCATGGACAAGATCACTTGGATATAAGATTGTTGATGAATGGAGACCATGGTTAATCGATGATCAAGTTGCAGGTTTTACACAAGGATATGCCAACAAACTCAGATTTTTGACGGTAAAGGGGTCTGGACATACTGTTCCAGAATATAAGCCAAAAGAGTCATTGTACTTTTACAAGCATTTTCTGGAGGGAACTCCTATATAA 1482 0.3779 MSNLYLILLHIFLTFVLTHSAPKGSLITNVPGFNGSLPSKHYGGYVTIDKSHGKNLYYYFVQSEGNSSKDPIVLWLNGGPGCSSFDGFVFEHGPFNFEKPVTKGGLPKLKLNPYSWSKVSNIIYLDSPVGVGFSYSRNETDYGTGDEQTALDTHVFLLKWFELYPEFLANPLFLAGESYAGVYVPTLAHKIVKGIEAGIKTKLNFKGYLIGNPVADEEFDGNALVPFAHGMGLISDQIFEDTVKACNGTFYITDFDPCSKLISKIHSIIRALNRYDILEPCFYGDEKEENHKHNPKLPLSFRQLGKTEKSLPIRKRMFGRAWPYGAIVQDGIVPSWPQLISNLNTAPPCTDDEIAMVWLNNPDVRKAIHTVEKSVVSEWVLCTSKVIYHHDLGSMIPYHKNLTSKGYSALIYSGDHDMCVPFTGTEAWTRSLGYKIVDEWRPWLIDDQVAGFTQGYANKLRFLTVKGSGHTVPEYKPKESLYFYKHFLEGTPI* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3464 493 ProSitePatterns Serine carboxypeptidases, histidine active site. 460 477 IPR033124 GO:0004185
Psa3g3464 493 Gene3D - 346 493 - -
Psa3g3464 493 Pfam Serine carboxypeptidase 31 490 IPR001563 GO:0004185|GO:0006508
Psa3g3464 493 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Psa3g3464 493 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 13 491 - -
Psa3g3464 493 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 491 IPR001563 GO:0004185|GO:0006508
Psa3g3464 493 SUPERFAMILY alpha/beta-Hydrolases 27 492 IPR029058 -
Psa3g3464 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Psa3g3464 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Psa3g3464 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Psa3g3464 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 460 473 IPR001563 GO:0004185|GO:0006508
Psa3g3464 493 Gene3D alpha/beta hydrolase 20 319 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3464 Psa-Chr3 292552491 292555551 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3464 354 493 Calmodulin-binding Proteins AT2G22960 50.000 1.54e-45 155